RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 SERAC1Q96JX3 654 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 BBS4Q96RK4 519 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 SLC29A1Q99808 456 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 EBNA1BP2Q99848 306 aaKnown RBP6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 C1orf50Q9BV19 199 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 CADM1Q9BY67 442 aaKnown RBP6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 B3GNT5Q9BYG0 378 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 CHRDQ9H2X0 955 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 UGT1A7Q9HAW7 530 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 UGT1A10Q9HAW8 530 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 UGT1A8Q9HAW9 530 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 RC3H2Q9HBD1 1191 aaKnown RBP6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 POPDC2Q9HBU9 364 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 CHST12Q9NRB3 414 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 ACTR3BQ9P1U1 418 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 TXNDC16Q9P2K2 825 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 APPL1Q9UKG1 709 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 BAG5Q9UL15 447 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 DTX4Q9Y2E6 619 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 RPH3AQ9Y2J0 694 aaPredicted RBP6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 CPQQ9Y646 472 aa6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 DICER1Q9UPY3 1922 aaKnown RBP6.66□□□□□ -1.34
CDKAL1-204ENST00000613575 GLTPD2A6NH11 291 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 FAM159BA6NKW6 160 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 MEI4A8MW99 385 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 KBTBD13C9JR72 458 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 GABRDO14764 452 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 GSC2O15499 205 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 BUD23O43709 281 aaKnown RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 DYRK3O43781 588 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 KRT37O76014 449 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 METTL18O95568 372 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 APOC1P02654 83 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 INHBAP08476 426 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 CDH1P12830 882 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ZNF16P17020 682 aaPredicted RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 WARSP23381 471 aaKnown RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 CYP2F1P24903 491 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ADRA1DP25100 572 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 LMO2P25791 158 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 MAOBP27338 520 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 HOXC8P31273 242 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 MATKP42679 507 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 CLCN4P51793 760 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 BCAT1P54687 386 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 AIF1P55008 147 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 COPZ1P61923 177 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 SF3A3Q12874 501 aaKnown RBP eCLIP6.65□□□□□ -1.343e-8■□□□□ 11.3
CDKAL1-204ENST00000613575 ITGADQ13349 1161 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 TOP3AQ13472 1001 aaPredicted RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ERV3-1Q14264 604 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ZNF846Q147U1 533 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 CDK10Q15131 360 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 PRKD1Q15139 912 aaPredicted RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 FAM110CQ1W6H9 321 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 SLC25A52Q3SY17 297 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ESCO2Q56NI9 601 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 FBXO47Q5MNV8 452 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 STEAP4Q687X5 459 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 PSAPL1Q6NUJ1 521 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 SCYL2Q6P3W7 929 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ARSKQ6UWY0 536 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ZNF534Q76KX8 674 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 DHDDSQ86SQ9 333 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 PRPF39Q86UA1 669 aaKnown RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 TOP6BLQ8N6T0 577 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 C7orf31Q8N865 590 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 OR6J1Q8NGC5 347 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 OR6B3Q8NGW1 331 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ZNF420Q8TAQ5 688 aaPredicted RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 TBC1D15Q8TC07 691 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 HDAC2Q92769 488 aaKnown RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ATP2A3Q93084 1043 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 MYDGFQ969H8 173 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 MARC2Q969Z3 335 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ZUFSPQ96AP4 578 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 C18orf25Q96B23 403 aaPredicted RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 PHF21AQ96BD5 680 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 APOPT1Q96IL0 206 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 CMTM3Q96MX0 182 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 CSPG4P5Q96PW8 444 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 SLC9A7Q96T83 725 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ZPBPQ9BS86 351 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 DUSP16Q9BY84 665 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 SLC6A15Q9H2J7 730 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 MAGEE1Q9HCI5 957 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 NGRNQ9NPE2 291 aaKnown RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 EIF2B3Q9NR50 452 aaKnown RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 TAS2R1Q9NYW7 299 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ZFP69BQ9UJL9 534 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 GJD2Q9UKL4 321 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 ERVK-19Q9WJR5 959 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 MTO1Q9Y2Z2 717 aaKnown RBP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 PLLPQ9Y342 182 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 IPPQ9Y573 584 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 AP4S1Q9Y587 144 aa6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 SF3B1O75533 1304 aaKnown RBP eCLIP6.65□□□□□ -1.34
CDKAL1-204ENST00000613575 CCL15-CCL14A0A0B4J2E2 113 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 HMX2A2RU54 273 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 C12orf71A8MTZ7 269 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms