RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 SMR3AQ99954 134 aa9.09□□□□□ -0.95
CTCFL-220ENST00000608858 HERPUD2Q9BSE4 406 aa9.09□□□□□ -0.95
CTCFL-220ENST00000608858 PDFQ9HBH1 243 aa9.09□□□□□ -0.95
CTCFL-220ENST00000608858 METTL5Q9NRN9 209 aaKnown RBP9.09□□□□□ -0.95
CTCFL-220ENST00000608858 SLC23A2Q9UGH3 650 aa9.09□□□□□ -0.95
CTCFL-220ENST00000608858 CNOT6Q9ULM6 557 aaKnown RBP9.09□□□□□ -0.95
CTCFL-220ENST00000608858 HPSEQ9Y251 543 aa9.09□□□□□ -0.95
CTCFL-220ENST00000608858 DNAJC16Q9Y2G8 782 aa9.09□□□□□ -0.95
CTCFL-220ENST00000608858 CNTRLQ7Z7A1 2325 aa9.09□□□□□ -0.95
CTCFL-220ENST00000608858 A0A1W2PQJ5 194 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 TMEM200CA6NKL6 621 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 OR5K4A6NMS3 321 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 PDZK1P1A8MUH7 402 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 P4HA2O15460 535 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 GRID2O43424 1007 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 WISP2O76076 250 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 CPP00450 1065 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 RAB40ALP0C0E4 278 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 SLC2A4P14672 509 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 GABRB2P47870 512 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 CSNK1DP48730 415 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 DRG2P55039 364 aaKnown RBP9.08□□□□□ -0.96
CTCFL-220ENST00000608858 ACY1Q03154 408 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 PTSQ03393 145 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 LTBQ06643 244 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 DPTQ07507 201 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 GPR18Q14330 331 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 SKOR2Q2VWA4 1001 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-220ENST00000608858 PARP15Q460N3 678 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 DCAF10Q5QP82 559 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 GFRALQ6UXV0 394 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 ZNF765Q7L2R6 523 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 DSELQ8IZU8 1212 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.08□□□□□ -0.96
CTCFL-220ENST00000608858 TMEM35BQ8NCS4 154 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 JOSD2Q8TAC2 188 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 TM9SF4Q92544 642 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 SNX21Q969T3 373 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 MTFMTQ96DP5 389 aaKnown RBP9.08□□□□□ -0.96
CTCFL-220ENST00000608858 COX14Q96I36 57 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 SLC41A2Q96JW4 573 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 PPM1MQ96MI6 270 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 FCRL4Q96PJ5 515 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 GBP5Q96PP8 586 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 WDR77Q9BQA1 342 aaPredicted RBP9.08□□□□□ -0.96
CTCFL-220ENST00000608858 RETREG1Q9H6L5 497 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 OLAHQ9NV23 265 aa9.08□□□□□ -0.96
CTCFL-220ENST00000608858 UBA6A0AVT1 1052 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 WASH4PA8MWX3 477 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 DFFAO00273 331 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 PEX12O00623 359 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 UNC5CO95185 931 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 NEFLP07196 543 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 CYP2A6P11509 494 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 PBX1P40424 430 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 ARCN1P48444 511 aaKnown RBP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 IST1P53990 364 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 CSNK1G2P78368 415 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 NSUN2Q08J23 767 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 ZNF169Q14929 603 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 TDRD12Q587J7 1177 aaKnown RBP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 LRRC66Q68CR7 880 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 PLEKHA7Q6IQ23 1121 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 KLHL10Q6JEL2 608 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 CRTC3Q6UUV7 619 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 FAM180AQ6UWF9 173 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 TMEM207Q6UWW9 146 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 SLFN11Q7Z7L1 901 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 RAB43Q86YS6 212 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 TGIF2LYQ8IUE0 185 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 PHYKPLQ8IUZ5 450 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 UMODL1-AS1Q8N2C9 162 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 OR1N1Q8NGS0 311 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 FAM172AQ8WUF8 416 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 ZNF501Q96CX3 271 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 SCRN2Q96FV2 425 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 FER1L6-AS2Q96M78 137 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 SLC7A5P2Q9GIP4 190 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 NOD2Q9HC29 1040 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 SLC40A1Q9NP59 571 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 P4HTMQ9NXG6 502 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 KCTD5Q9NXV2 234 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 DTLQ9NZJ0 730 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 ATXN10Q9UBB4 475 aa9.07□□□□□ -0.96
CTCFL-220ENST00000608858 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTCFL-220ENST00000608858 IPO13O94829 963 aaKnown RBP9.06□□□□□ -0.96
CTCFL-220ENST00000608858 ZNF202O95125 648 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 PDHA1P08559 390 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 BRAFP15056 766 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 ZNF8P17098 575 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-220ENST00000608858 TEAD1P28347 426 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 SDC4P31431 198 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 CAPZBP47756 277 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 GSDMDP57764 484 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 MAXP61244 160 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 PPP2R2AP63151 447 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 TUBB4BP68371 445 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 HSD11B2P80365 405 aa9.06□□□□□ -0.96
CTCFL-220ENST00000608858 ADORA2A-AS1P86434 159 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms