RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 IFI35P80217 286 aaPredicted RBP17.62■□□□□ 0.41
MKS1-209ENST00000580127 GBE1Q04446 702 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 PPIDQ08752 370 aaKnown RBP17.62■□□□□ 0.41
MKS1-209ENST00000580127 AP1B1Q10567 949 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 PDK1Q15118 436 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 ALS2CLQ60I27 953 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 CRTC3Q6UUV7 619 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 ABRAXAS1Q6UWZ7 409 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 H2AFVQ71UI9 128 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 ADGRG6Q86SQ4 1221 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 PPP1R3BQ86XI6 285 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 CTNNBL1Q8WYA6 563 aaPredicted RBP17.62■□□□□ 0.41
MKS1-209ENST00000580127 FAF2Q96CS3 445 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 FCRL4Q96PJ5 515 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 TWSG1Q9GZX9 223 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 BRD8Q9H0E9 1235 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 LNPEPQ9UIQ6 1025 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 CROTQ9UKG9 612 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 CAPN11Q9UMQ6 739 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 DNAJC16Q9Y2G8 782 aa17.62■□□□□ 0.41
MKS1-209ENST00000580127 PCYT1BQ9Y5K3 369 aaPredicted RBP17.62■□□□□ 0.41
MKS1-209ENST00000580127 KCNK1O00180 336 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 RFPL1O75677 317 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 KIAA0754O94854 1291 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 FGF5P12034 268 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 ZFXP17010 805 aaPredicted RBP17.61■□□□□ 0.41
MKS1-209ENST00000580127 ARL4DP49703 201 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 GFERP55789 205 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 PDE1BQ01064 536 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 CDK18Q07002 472 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.61■□□□□ 0.41
MKS1-209ENST00000580127 AGAP9Q5VTM2 703 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 ASB18Q6ZVZ8 466 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 PRSS42Q7Z5A4 293 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 GPR26Q8NDV2 337 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 GDAP1Q8TB36 358 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 RNF157Q96PX1 679 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 RAB33BQ9H082 229 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 CBX8Q9HC52 389 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 SLC40A1Q9NP59 571 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 ARFGAP3Q9NP61 516 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.61■□□□□ 0.41
MKS1-209ENST00000580127 DTLQ9NZJ0 730 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 ZNF624Q9P2J8 865 aaPredicted RBP17.61■□□□□ 0.41
MKS1-209ENST00000580127 NFKBIL1Q9UBC1 381 aaPredicted RBP17.61■□□□□ 0.41
MKS1-209ENST00000580127 EPHA6Q9UF33 1036 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 SHOC2Q9UQ13 582 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 TP53TG5Q9Y2B4 290 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 HEY1Q9Y5J3 304 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 ADGRG1Q9Y653 693 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 SLC30A1Q9Y6M5 507 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 LRRK2Q5S007 2527 aa17.61■□□□□ 0.41
MKS1-209ENST00000580127 RP1L1Q8IWN7 2480 aaPredicted RBP17.6■□□□□ 0.41
MKS1-209ENST00000580127 ZNF487B1APH4 448 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 C21orf140B9A014 251 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 SPAG6O75602 509 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 CREG1O75629 220 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 MMP2P08253 660 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 KDELR1P24390 212 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 CASP14P31944 242 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 UBASH3AP57075 661 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 SLC10A2Q12908 348 aaPredicted RBP17.6■□□□□ 0.41
MKS1-209ENST00000580127 GALNT3Q14435 633 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 SLC14A2Q15849 920 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 SEPT7Q16181 437 aaKnown RBP17.6■□□□□ 0.41
MKS1-209ENST00000580127 ZDHHC20Q5W0Z9 365 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 IRGCQ6NXR0 463 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 BZW1Q7L1Q6 419 aaKnown RBP17.6■□□□□ 0.41
MKS1-209ENST00000580127 PQLC3Q8N755 202 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 UBXN4Q92575 508 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 IMP4Q96G21 291 aaKnown RBP17.6■□□□□ 0.41
MKS1-209ENST00000580127 ELMO2Q96JJ3 720 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 GPR87Q9BY21 358 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 ZCCHC2Q9C0B9 1178 aaKnown RBP17.6■□□□□ 0.41
MKS1-209ENST00000580127 SLC25A51Q9H1U9 297 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 LRRC4CQ9HCJ2 640 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 OGFRQ9NZT2 677 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 SCHIP1Q9P0W5 487 aaPredicted RBP17.6■□□□□ 0.41
MKS1-209ENST00000580127 RARRES3Q9UL19 164 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 PCDHGA6Q9Y5G7 932 aa17.6■□□□□ 0.41
MKS1-209ENST00000580127 CDC14CA4D256 554 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 PPP1R12AO14974 1030 aaPredicted RBP17.59■□□□□ 0.41
MKS1-209ENST00000580127 SLC4A1P02730 911 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 NELFEP18615 380 aaKnown RBP17.59■□□□□ 0.41
MKS1-209ENST00000580127 RPL10P27635 214 aaKnown RBP17.59■□□□□ 0.41
MKS1-209ENST00000580127 CAPZBP47756 277 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 PLA2G4EQ3MJ16 856 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 ZNF648Q5T619 568 aaPredicted RBP17.59■□□□□ 0.41
MKS1-209ENST00000580127 ATP1A1-AS1Q5TC04 95 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 VSIG1Q86XK7 387 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 EFCAB3Q8N7B9 438 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 CNTD1Q8N815 330 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 SIDT2Q8NBJ9 832 aaKnown RBP17.59■□□□□ 0.41
MKS1-209ENST00000580127 KLHL6Q8WZ60 621 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 AGAP3Q96P47 875 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 SLC23A2Q9UGH3 650 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 MAN2B2Q9Y2E5 1009 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 ZNF711Q9Y462 761 aa17.59■□□□□ 0.41
MKS1-209ENST00000580127 MRPS18BQ9Y676 258 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms