RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 FADS2P1A8MWK0 482 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 TMCO5BA8MYB1 307 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 KMOO15229 486 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 ZNF185O15231 689 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 FZD6O60353 706 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 TMEM63AO94886 807 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 SLC25A14O95258 325 aaPredicted RBP11.73□□□□□ -0.53
CTNS-208ENST00000574218 PEX11BO96011 259 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 ATP1A3P13637 1013 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 ZNF8P17098 575 aaPredicted RBP11.73□□□□□ -0.53
CTNS-208ENST00000574218 VCLP18206 1134 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 IDSP22304 550 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 SLC19A1P41440 591 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 HALP42357 657 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 SPINT3P49223 89 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 RRADP55042 308 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 MAMLD1Q13495 774 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 IL10RAQ13651 578 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 ANKRD20A8PQ5CZ79 823 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 HENMT1Q5T8I9 393 aaKnown RBP11.73□□□□□ -0.53
CTNS-208ENST00000574218 C1QL3Q5VWW1 255 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 LRRTM4Q86VH4 590 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 TMEM126BQ8IUX1 230 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 FDCSPQ8NFU4 85 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 HSPH1Q92598 858 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 TCTN2Q96GX1 697 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 ZNF514Q96K75 400 aaPredicted RBP11.73□□□□□ -0.53
CTNS-208ENST00000574218 SMIM14Q96QK8 99 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 RUFY1Q96T51 708 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 SPATA16Q9BXB7 569 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 RUBCNLQ9H714 662 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 ARFGAP3Q9NP61 516 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 SCHIP1Q9P0W5 487 aaPredicted RBP11.73□□□□□ -0.53
CTNS-208ENST00000574218 EPHA6Q9UF33 1036 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 CNOT6Q9ULM6 557 aaKnown RBP11.73□□□□□ -0.53
CTNS-208ENST00000574218 MDC1Q14676 2089 aaKnown RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 UBA6A0AVT1 1052 aaPredicted RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 ANKUB1A6NFN9 424 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 WIPF3A6NGB9 483 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 EPHB6O15197 1021 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 SCRG1O75711 98 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 TIAF1O95411 115 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 EBLN1P0CF75 366 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 ZNF7P17097 686 aaPredicted RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 LPOP22079 712 aaPredicted RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 PER3P56645 1201 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 GSDMDP57764 484 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 RPL26P61254 145 aaKnown RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 UBE2HP62256 183 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 GPR18Q14330 331 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 PLCL1Q15111 1095 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 KYNUQ16719 465 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 SMTNL2Q2TAL5 461 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 TMTC4Q5T4D3 741 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 TIGD7Q6NT04 549 aaPredicted RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 MED25Q71SY5 747 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 LRRC49Q8IUZ0 686 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 Q8NA96 180 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 SGSM3Q96HU1 749 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 TIMM29Q9BSF4 260 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 MLPHQ9BV36 600 aaPredicted RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 TDRD1Q9BXT4 1180 aaKnown RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 RAB33BQ9H082 229 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 TRIM39Q9HCM9 518 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 FGF21Q9NSA1 209 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 ZNF624Q9P2J8 865 aaPredicted RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 RPL26L1Q9UNX3 145 aaKnown RBP11.72□□□□□ -0.53
CTNS-208ENST00000574218 SCINQ9Y6U3 715 aa11.72□□□□□ -0.53
CTNS-208ENST00000574218 SPTBP11277 2137 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 IGHV5-51A0A0C4DH38 117 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 HNRNPRO43390 633 aaKnown RBP11.71□□□□□ -0.53
CTNS-208ENST00000574218 KRT86O43790 486 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 KLHL41O60662 606 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 CEACAM4O75871 244 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 JCHAINP01591 159 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 FOLR1P15328 257 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 FERP16591 822 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 RPL10P27635 214 aaKnown RBP11.71□□□□□ -0.53
CTNS-208ENST00000574218 ZNF165P49910 485 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 VAV2P52735 878 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 DSC2Q02487 901 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 CDK18Q07002 472 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 GTF2H3Q13889 308 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 KRT81Q14533 505 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 KCNAB1Q14722 419 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 KRT31Q15323 416 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 DPYSL2Q16555 572 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 BOLA3Q53S33 107 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 DNTTIP2Q5QJE6 756 aaKnown RBP11.71□□□□□ -0.53
CTNS-208ENST00000574218 LYPLAL1Q5VWZ2 237 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 ALS2CLQ60I27 953 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 PLEKHA7Q6IQ23 1121 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 POLNQ7Z5Q5 900 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 KMT5CQ86Y97 462 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 TEX26Q8N6G2 289 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms