RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 ACTR1AP61163 376 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 CTBSQ01459 385 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 CYP4F3Q08477 520 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 CALCOCO2Q13137 446 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 MSLNQ13421 630 aaPredicted RBP13.61□□□□□ -0.23
NEIL1-220ENST00000568881 RTP5Q14D33 572 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 CERCAMQ5T4B2 595 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 ALS2CLQ60I27 953 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 SLC30A9Q6PML9 568 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 MARK2Q7KZI7 788 aaKnown RBP13.61□□□□□ -0.23
NEIL1-220ENST00000568881 PPHLN1Q8NEY8 458 aaKnown RBP13.61□□□□□ -0.23
NEIL1-220ENST00000568881 CCDC74AQ96AQ1 378 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 TTC25Q96NG3 672 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 RANBP9Q96S59 729 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 C19orf43Q9BQ61 176 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 LRRC1Q9BTT6 524 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 ZCCHC2Q9C0B9 1178 aaKnown RBP13.61□□□□□ -0.23
NEIL1-220ENST00000568881 IL22Q9GZX6 179 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 L2HGDHQ9H9P8 463 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 BPIFA1Q9NP55 256 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 TAAR2Q9P1P5 351 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 LRIT1Q9P2V4 623 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 ZNHIT2Q9UHR6 403 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 APPL1Q9UKG1 709 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 TMEM98Q9Y2Y6 226 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 SNX24Q9Y343 169 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 CFAP47Q6ZTR5 3102 aa13.61□□□□□ -0.23
NEIL1-220ENST00000568881 CASC3O15234 703 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 BUD23O43709 281 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 VEGFDO43915 354 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 SEC31AO94979 1220 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 BPIP17213 487 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 SPAM1P38567 509 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 RPL21P46778 160 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 POLD2P49005 469 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 ITGA8P53708 1063 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 ITGA9Q13797 1035 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 GTF2H3Q13889 308 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 GLE1Q53GS7 698 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 PYCR3Q53H96 274 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 PCID2Q5JVF3 399 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 PERM1Q5SV97 790 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 DUPD1Q68J44 220 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 NLRP9Q7RTR0 991 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 TRIM74Q86UV6 250 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 CAND1Q86VP6 1230 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 CCNJLQ8IV13 435 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 AVL9Q8NBF6 648 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 NOA1Q8NC60 698 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 OR4K2Q8NGD2 314 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 MDM1Q8TC05 714 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 DTX3LQ8TDB6 740 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 STYXQ8WUJ0 223 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 PTCD2Q8WV60 388 aaKnown RBP13.6□□□□□ -0.23
NEIL1-220ENST00000568881 GLYATL1Q969I3 302 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 TMEM74Q96NL1 305 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 AGAP2Q99490 1192 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 STRADBQ9C0K7 418 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 DPH5Q9H2P9 285 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 TRIM39Q9HCM9 518 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 WHRNQ9P202 907 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 KNTC1P50748 2209 aa13.6□□□□□ -0.23
NEIL1-220ENST00000568881 GLYATL1P3A0A0U1RQE8 302 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 MAGEB16A2A368 324 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 MROH6A6NGR9 719 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 SDR42E2A6NKP2 422 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 SRRM3A6NNA2 597 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 FADS2P1A8MWK0 482 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 TAF4O00268 1085 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 GRID2O43424 1007 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 NOBOXO60393 691 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 RPLP0P05388 317 aaKnown RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 VCLP18206 1134 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 MGAT1P26572 445 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 ZNF140P52738 457 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 CLPPQ16740 277 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 ISXQ2M1V0 245 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 HIBCHQ6NVY1 386 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 CASC4Q6P4E1 433 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 ZNF534Q76KX8 674 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 CHST15Q7LFX5 561 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 PDIK1LQ8N165 341 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 GPR26Q8NDV2 337 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 CCL4L1Q8NHW4 92 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 GDAP1Q8TB36 358 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 PEX13Q92968 403 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 SERPINB12Q96P63 405 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 VPS35Q96QK1 796 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 NLE1Q9NVX2 485 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 AKAP7Q9P0M2 348 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-220ENST00000568881 RIMKLBQ9ULI2 386 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 TCAF1Q9Y4C2 921 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 KCTD3Q9Y597 815 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 LAMA5O15230 3695 aa13.59□□□□□ -0.23
NEIL1-220ENST00000568881 ZNF106Q9H2Y7 1883 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms