RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SEMA3DO95025 777 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 RAP2AP10114 183 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PTPRAP18433 802 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ITIH1P19827 911 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 MZF1P28698 734 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 RPS3AP61247 264 aaKnown RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 CXCL9Q07325 125 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TWF1Q12792 350 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TP53BP2Q13625 1128 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 GALNT3Q14435 633 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ACAP2Q15057 778 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TAF12Q16514 161 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 CYBRD1Q53TN4 286 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PDZK1Q5T2W1 519 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 SPATC1Q76KD6 591 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 GPSM1Q86YR5 675 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 GALNT12Q8IXK2 581 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 OR9Q1Q8NGQ5 310 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 OR52J3Q8NH60 311 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 ANKRD49Q8WVL7 239 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 MYRFLQ96LU7 910 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 PDGFCQ9NRA1 345 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 AGPAT4Q9NRZ5 378 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 KRT84Q9NSB2 600 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TMEM161AQ9NX61 479 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 TMEM181Q9P2C4 612 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 UXTQ9UBK9 157 aaPredicted RBP10.82□□□□□ -0.68
PALB2-206ENST00000568219 HACL1Q9UJ83 578 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 VPS28Q9UK41 221 aa10.82□□□□□ -0.68
PALB2-206ENST00000568219 FAM47E-STBD1D6RA91 191 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 GUCY1B2O75343 617 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 TSPAN9O75954 239 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 IFNA8P32881 189 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 SLC26A3P40879 764 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 CLK3P49761 638 aaKnown RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 SH3BP2P78314 561 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 TAZQ16635 292 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 SV2CQ496J9 727 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 SDE2Q6IQ49 451 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 FAM117BQ6P1L5 589 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 TBPL2Q6SJ96 375 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 KLHL17Q6TDP4 642 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 CYS1Q717R9 158 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 CDH24Q86UP0 819 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 RPRD1AQ96P16 312 aaPredicted RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 CYP2S1Q96SQ9 504 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 NIFKQ9BYG3 293 aaKnown RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 ZNF556Q9HAH1 456 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 TOR4AQ9NXH8 423 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 PAQR5Q9NXK6 330 aaPredicted RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 WWOXQ9NZC7 414 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 SYNDIG1LA6NDD5 238 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 SLC22A1O15245 554 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 B3GAT3O94766 335 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 CSF2P04141 144 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 UMPSP11172 480 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 MYCLP1P12525 358 aaPredicted RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 HTR1BP28222 390 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 PHKG1Q16816 387 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 PAGE3Q5JUK9 113 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 ZCCHC8Q6NZY4 707 aaKnown RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 GPRIN3Q6ZVF9 776 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 PHACTR4Q8IZ21 702 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 ZUFSPQ96AP4 578 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 OR52E6Q96RD3 313 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 LRRC3Q9BY71 257 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 NPEPPSL1A6NEC2 478 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 CASTOR2A6NHX0 329 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 MITFO75030 526 aaPredicted RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 TMCC2O75069 709 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 VPS26AO75436 327 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 DNTTP04053 509 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 CTSHP09668 335 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 POU2F1P14859 743 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 CSTF3Q12996 717 aaKnown RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 CRY1Q16526 586 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 TPRG1LQ5T0D9 272 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 FAM45BPQ6NSW5 357 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 NOTUMQ6P988 496 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 ENKURQ8TC29 256 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 FAM45AQ8TCE6 357 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 AURKBQ96GD4 344 aaPredicted RBP10.81□□□□□ -0.68
PALB2-206ENST00000568219 SLC30A3Q99726 388 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 SLC2A11Q9BYW1 496 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 PDZD7Q9H5P4 517 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 PDLIM7Q9NR12 457 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 ARMC1Q9NVT9 282 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.81□□□□□ -0.68
PALB2-206ENST00000568219 IKZF3Q9UKT9 509 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 SYNPO2Q9UMS6 1093 aa10.81□□□□□ -0.68
PALB2-206ENST00000568219 A0A1W2PP18 115 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 A0A1W2PQ72 361 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 SMIM30A4D0T7 59 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 KLRG2A4D1S0 409 aaPredicted RBP10.8□□□□□ -0.68
PALB2-206ENST00000568219 ZW10O43264 779 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 CAPN15O75808 1086 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 C1RP00736 705 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 COL6A1P12109 1028 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 FSHRP23945 695 aa10.8□□□□□ -0.68
PALB2-206ENST00000568219 RAB25P57735 213 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms