RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PLEKHA5Q9HAU0 1116 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 DDX28Q9NUL7 540 aaKnown RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 INTS7Q9NVH2 962 aaKnown RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 FBXO10Q9UK96 956 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ANKRD6Q9Y2G4 727 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 TIMM13Q9Y5L4 95 aaPredicted RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 MANSC4A6NHS7 340 aaPredicted RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 RAD51BO15315 384 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ELNP15502 786 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 PCMT1P22061 227 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ADIGQ0VDE8 80 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 HABP4Q5JVS0 413 aaKnown RBP16.16■□□□□ 0.18
LINC00554-201ENST00000564841 BTBD8Q5XKL5 378 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 OR13J1Q8NGT2 312 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ROPN1LQ96C74 230 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 C19orf60Q96EN9 201 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 NODALQ96S42 347 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 RHOBTB2Q9BYZ6 727 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 CASS4Q9NQ75 786 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 HPS4Q9NQG7 708 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 ERVK-18Q9QC07 812 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 PCDHA9Q9Y5H5 950 aa16.16■□□□□ 0.18
LINC00554-201ENST00000564841 COL1A2P08123 1366 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 A0A1B0GTL3 188 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 C17orf102A2RUQ5 167 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 DYRK3O43781 588 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 SIX3O95343 332 aaPredicted RBP16.15■□□□□ 0.18
LINC00554-201ENST00000564841 CPT1AP50416 773 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 NFYCQ13952 458 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 SCIMPQ6UWF3 145 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 C17orf99Q6UX52 265 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 LRRC49Q8IUZ0 686 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 MINDY2Q8NBR6 621 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 RNF139Q8WU17 664 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 FRS2Q8WU20 508 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 ANKRD49Q8WVL7 239 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 FAR1Q8WVX9 515 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 DSN1Q9H410 356 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 TRIM39Q9HCM9 518 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 FAM118AQ9NWS6 357 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 GMIPQ9P107 970 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 SNX5Q9Y5X3 404 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 GPIP06744 558 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 LINC00032P0C843 101 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 EIF2DP41214 584 aaKnown RBP16.15■□□□□ 0.18
LINC00554-201ENST00000564841 HACD2Q6Y1H2 254 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 BTN2A3PQ96KV6 586 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 LRRC4Q9HBW1 653 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 IGSF5Q9NSI5 407 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 TESMINQ9Y4I5 508 aa16.15■□□□□ 0.18
LINC00554-201ENST00000564841 OAS3Q9Y6K5 1087 aaKnown RBP16.15■□□□□ 0.18
LINC00554-201ENST00000564841 ZNF99A8MXY4 864 aaPredicted RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 TOMM70O94826 608 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 IPO13O94829 963 aaKnown RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 PSMB9P28065 219 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 FMO3P31513 532 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 FLT3LGP49771 235 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 SOX4Q06945 474 aaPredicted RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 DAG1Q14118 895 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 CBX2Q14781 532 aaPredicted RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 DGUOKQ16854 277 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 LDB1Q86U70 411 aaPredicted RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 SYTL1Q8IYJ3 562 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 TBC1D21Q8IYX1 336 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 ARRDC4Q8NCT1 418 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 TRPV1Q8NER1 839 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 CELF6Q96J87 481 aaKnown RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 GAD1Q99259 594 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 CARS2Q9HA77 564 aaKnown RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 DNAJC15Q9Y5T4 150 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 SIP14410 1827 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 ANK1P16157 1881 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 H0YAE9 185 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 RGS13O14921 159 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 PIP5K1BO14986 540 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 SLC1A2P43004 574 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 ALDH3A2P51648 485 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 SH3BP2P78314 561 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 CEP78Q5JTW2 689 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 TAF2Q6P1X5 1199 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 NLGN4XQ8N0W4 816 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 RHOXF1Q8NHV9 184 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 MBOAT4Q96T53 435 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 HOPXQ9BPY8 73 aaPredicted RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 MRPL57Q9BQC6 102 aaKnown RBP16.14■□□□□ 0.17
LINC00554-201ENST00000564841 GSTO2Q9H4Y5 243 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 U3KQV3 271 aa16.14■□□□□ 0.17
LINC00554-201ENST00000564841 SMIM28A0A1B0GU29 152 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 ASPDHA6ND91 283 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 M0QYT0 321 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 MT-CYBP00156 380 aaPredicted RBP16.13■□□□□ 0.17
LINC00554-201ENST00000564841 EIF2S1P05198 315 aaKnown RBP16.13■□□□□ 0.17
LINC00554-201ENST00000564841 GLUD2P49448 558 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 BNIP2Q12982 314 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 KCNAB2Q13303 367 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 RPS6KA2Q15349 733 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 MINDY1Q8N5J2 469 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 BEST2Q8NFU1 509 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 DYNC2LI1Q8TCX1 351 aa16.13■□□□□ 0.17
LINC00554-201ENST00000564841 WNT8BQ93098 351 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms