RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 MOV10Q9HCE1 1003 aaKnown RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 PTTG2Q9NZH5 202 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 COL1A2P08123 1366 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 FAM172BPA6NC97 362 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CDK14O94921 469 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ITGA3P26006 1051 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 AQP1P29972 269 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CDKN2BP42772 138 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CLCQ05315 142 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RBBP4Q09028 425 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 C2orf80Q0P641 193 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 GRPEL2Q8TAA5 225 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TNFAIP8L1Q8WVP5 186 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ACAT2Q9BWD1 397 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 NUSAP1Q9BXS6 441 aaKnown RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ABCG8Q9H221 673 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 GBA3Q9H227 469 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 KAT8Q9H7Z6 458 aaKnown RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TRNAU1APQ9NX07 287 aaKnown RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 PDE10AQ9Y233 779 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 BAZ2BQ9UIF8 2168 aaKnown RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 KCNU1A8MYU2 1149 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 WRBO00258 174 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 HCN1O60741 890 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 SPAM1P38567 509 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 E2F2Q14209 437 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 VPS26BQ4G0F5 336 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 GALNT5Q7Z7M9 940 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RALGPS2Q86X27 583 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZNF433Q8N7K0 673 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TMCO6Q96DC7 493 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 C5orf34Q96MH7 638 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 FCRL4Q96PJ5 515 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC25A51Q9H1U9 297 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 MGAT4AQ9UM21 535 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 SHOX2O60902 331 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 LRCH4O75427 683 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ADH1CP00326 375 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ARF4P18085 180 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 SEPHS1P49903 392 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZNF132P52740 706 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 FSTL1Q12841 308 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 MAP1SQ66K74 1059 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 PARGQ86W56 976 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 XYLT1Q86Y38 959 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 GPR135Q8IZ08 494 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CLHC1Q8NHS4 586 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RAB2BQ8WUD1 216 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 SNX33Q8WV41 574 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RNF31Q96EP0 1072 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 GPER1Q99527 375 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 PCDHGC3Q9UN70 934 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RBM47A0AV96 593 aaKnown RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 OR14I1A6ND48 311 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CLDN5O00501 218 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ORC5O43913 435 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CILPO75339 1184 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ANXA4P09525 319 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ITPKAP23677 461 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RAPSNQ13702 412 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TARBP2Q15633 366 aaKnown RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 RNF220Q5VTB9 566 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 FAM91A1Q658Y4 838 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 B3GALT6Q96L58 329 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 CPXM1Q96SM3 734 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TCF25Q9BQ70 676 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 ABCB9Q9NP78 766 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 UPB1Q9UBR1 384 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 FETUBQ9UGM5 382 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
CSPG4P11-201ENST00000560634 NPHS1O60500 1241 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 ATF6P18850 670 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 ALDH4A1P30038 563 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 DLG1Q12959 904 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 C6orf52Q5T4I8 152 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 AHSA2Q719I0 299 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 IRF2BP1Q8IU81 584 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 FIBCD1Q8N539 461 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC43A3Q8NBI5 491 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 AGAP2Q99490 1192 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 MRPL45Q9BRJ2 306 aaKnown RBP13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 GIN1Q9NXP7 522 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 APOC1P02654 83 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 GBE1Q04446 702 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 PCDH1Q08174 1060 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 VGLL4Q14135 290 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 GPR158Q5T848 1215 aa13.09□□□□□ -0.31
CSPG4P11-201ENST00000560634 HGSNATQ68CP4 663 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms