RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SPATS2LQ9NUQ6 558 aaKnown RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 VPS18Q9P253 973 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPM1-217ENST00000559108 CRLS1Q9UJA2 301 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 MOSPD1Q9UJG1 213 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 APPL1Q9UKG1 709 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 V9GYY5 206 aaPredicted RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 OR2AG2A6NM03 316 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 CD3EAPO15446 510 aaKnown RBP10.75□□□□□ -0.69
TPM1-217ENST00000559108 FFAR2O15552 330 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 GRID2O43424 1007 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 SH3BP5O60239 455 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 PCDHGA12O60330 932 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 MAGEC1O60732 1142 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 CBFA2T3O75081 653 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 USP1O94782 785 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 FAM153BP0C7A2 387 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ZNF883P0CG24 379 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ERVK-10P10266 1014 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 PGAM1P18669 254 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 HTR1BP28222 390 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 GABRB3P28472 473 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 SSTR1P30872 391 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 HOXD11P31277 338 aaPredicted RBP10.75□□□□□ -0.69
TPM1-217ENST00000559108 ABCG1P45844 678 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 LIMK1P53667 647 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ARL4CP56559 192 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 GPX6P59796 221 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 SARNPP82979 210 aaKnown RBP10.75□□□□□ -0.69
TPM1-217ENST00000559108 MPP1Q00013 466 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 CTBSQ01459 385 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ITGA9Q13797 1035 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 NAA30Q147X3 362 aaPredicted RBP10.75□□□□□ -0.69
TPM1-217ENST00000559108 DEFB133Q30KQ1 61 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 FAM153CQ494X1 144 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 TEX35Q5T0J7 233 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ZDHHC20Q5W0Z9 365 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 AFTPHQ6ULP2 937 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 IL27RAQ6UWB1 636 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 CAPN12Q6ZSI9 719 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 NLRP9Q7RTR0 991 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 TAS2R42Q7RTR8 314 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ZBED8Q8IZ13 594 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 PDIK1LQ8N165 341 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 GPBAR1Q8TDU6 330 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 SGSM3Q96HU1 749 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 C9orf72Q96LT7 481 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 OR2M4Q96R27 311 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 SAYSD1Q9NPB0 183 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 CATSPERZQ9NTU4 200 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ZDHHC3Q9NYG2 299 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ZC3H7BQ9UGR2 993 aaKnown RBP10.75□□□□□ -0.69
TPM1-217ENST00000559108 KCNK6Q9Y257 313 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 MED16Q9Y2X0 877 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 SLC30A1Q9Y6M5 507 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 FAM169AQ9Y6X4 670 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 DCHS1Q96JQ0 3298 aa10.75□□□□□ -0.69
TPM1-217ENST00000559108 ASXL3Q9C0F0 2248 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 A6NCN8 305 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 IQCF5A8MTL0 148 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 AP3B1O00203 1094 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 GIPC1O14908 333 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 YY2O15391 372 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 AQP9O43315 295 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 CDK14O94921 469 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 TNFP01375 233 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 ACP5P13686 325 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 KELP23276 732 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 SLC1A2P43004 574 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 ARRB1P49407 418 aaPredicted RBP10.74□□□□□ -0.69
TPM1-217ENST00000559108 PGGT1BP53609 377 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 HNRNPKP61978 463 aaKnown RBP eCLIP10.74□□□□□ -0.69
TPM1-217ENST00000559108 PRAMEP78395 509 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 CALCOCO2Q13137 446 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 CTBP1Q13363 440 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 TYSND1Q2T9J0 566 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 GPR33Q49SQ1 333 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 GLE1Q53GS7 698 aaKnown RBP10.74□□□□□ -0.69
TPM1-217ENST00000559108 HSP90AA5PQ58FG0 334 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 DNAJC21Q5F1R6 531 aaKnown RBP10.74□□□□□ -0.69
TPM1-217ENST00000559108 CTSL3PQ5NE16 218 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 LDLRAP1Q5SW96 308 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 TMEM220Q6QAJ8 160 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 NAPRTQ6XQN6 538 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 CHST15Q7LFX5 561 aaPredicted RBP10.74□□□□□ -0.69
TPM1-217ENST00000559108 NAXDQ8IW45 347 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 OXR1Q8N573 874 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 EID2Q8N6I1 236 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 BBOF1Q8ND07 529 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 GDAP1Q8TB36 358 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 IFT81Q8WYA0 676 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 LPGAT1Q92604 370 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 SKA1Q96BD8 255 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 P2RY12Q9H244 342 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 SCHIP1Q9P0W5 487 aaPredicted RBP10.74□□□□□ -0.69
TPM1-217ENST00000559108 SAMD15Q9P1V8 674 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 GALPQ9UBC7 116 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 ZNHIT2Q9UHR6 403 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 NFU1Q9UMS0 254 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 GPSM3Q9Y4H4 160 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms