RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ACADVLP49748 655 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 CSRP3P50461 194 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 HK3P52790 923 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 PPARDQ03181 441 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 SEPT6Q14141 434 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 COLEC12Q5KU26 742 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 TSTD2Q5T7W7 516 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 ZDHHC20Q5W0Z9 365 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 RD3Q7Z3Z2 195 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 HID1Q8IV36 788 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 PPIL6Q8IXY8 311 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 PHACTR4Q8IZ21 702 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 MPP5Q8N3R9 675 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 OR13J1Q8NGT2 312 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 ZNF398Q8TD17 642 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 STYXQ8WUJ0 223 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 GLYATL1Q969I3 302 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 NAF1Q96HR8 494 aaKnown RBP15.35■□□□□ 0.05
LINC01220-201ENST00000558575 TBATAQ96M53 351 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 SERPINB12Q96P63 405 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 CLPBQ9H078 707 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 CHRAC1Q9NRG0 131 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 SYBUQ9NX95 663 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 TCAF1Q9Y4C2 921 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 DGKBQ9Y6T7 804 aa15.35■□□□□ 0.05
LINC01220-201ENST00000558575 HEATR9A2RTY3 570 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 AGAP14A8MT82 685 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 H7C0S8 307 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 SRP72O76094 671 aaKnown RBP15.34■□□□□ 0.05
LINC01220-201ENST00000558575 CELA2BP08218 269 aaPredicted RBP15.34■□□□□ 0.05
LINC01220-201ENST00000558575 PRSS56P0CW18 603 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 MLNP12872 115 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 KELP23276 732 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 RPL21P46778 160 aaKnown RBP15.34■□□□□ 0.05
LINC01220-201ENST00000558575 CDKN1CP49918 316 aaPredicted RBP15.34■□□□□ 0.05
LINC01220-201ENST00000558575 TMPRSS3P57727 454 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 PDE1BQ01064 536 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 ACVR1Q04771 509 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 C1orf61Q13536 156 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 PCID2Q5JVF3 399 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 IZUMO3Q5VZ72 239 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 PDPK2PQ6A1A2 396 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 DOK6Q6PKX4 331 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 CNDP2Q96KP4 475 aaKnown RBP15.34■□□□□ 0.05
LINC01220-201ENST00000558575 SIGLEC10Q96LC7 697 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 PWWP2AQ96N64 755 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 VPS35Q96QK1 796 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 ERP44Q9BS26 406 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 LRRC61Q9BV99 259 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 TRIM31Q9BZY9 425 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 TRIM4Q9C037 500 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 FAM96AQ9H5X1 160 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 CYP4F12Q9HCS2 524 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 BFARQ9NZS9 450 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 ATXN10Q9UBB4 475 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 KLQ9UEF7 1012 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 RIMKLBQ9ULI2 386 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 SNX24Q9Y343 169 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 ST14Q9Y5Y6 855 aa15.34■□□□□ 0.05
LINC01220-201ENST00000558575 USP9YO00507 2555 aaPredicted RBP15.34■□□□□ 0.05
LINC01220-201ENST00000558575 SCN8AQ9UQD0 1980 aa15.33■□□□□ 0.05
LINC01220-201ENST00000558575 TDRD6O60522 2096 aaKnown RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 PRSS38A1L453 326 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 FAM187AA6NFU0 413 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 DNAJC6O75061 913 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 MTX2O75431 263 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 SLC25A14O95258 325 aaPredicted RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 RASGRP1O95267 797 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 LDOC1O95751 146 aaPredicted RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 NMBRP28336 390 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 HNRNPKP61978 463 aaKnown RBP eCLIP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 CKAP4Q07065 602 aaKnown RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 TUBB2AQ13885 445 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 TRADDQ15628 312 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 SKIDA1Q1XH10 827 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 INAVAQ3KP66 663 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 MSS51Q4VC12 460 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 FNBP1LQ5T0N5 605 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 DUPD1Q68J44 220 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 HIBCHQ6NVY1 386 aaPredicted RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 CES3Q6UWW8 571 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 ADGRG6Q86SQ4 1221 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 ZNF548Q8NEK5 533 aaPredicted RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 TRIM56Q9BRZ2 755 aaKnown RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 TUBB2BQ9BVA1 445 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 KIFC1Q9BW19 673 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 IL22Q9GZX6 179 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 ASB8Q9H765 288 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 TRIM39Q9HCM9 518 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 TREX1Q9NSU2 369 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 APPL1Q9UKG1 709 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 SUFUQ9UMX1 484 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 PLEKHM1Q9Y4G2 1056 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 COL27A1Q8IZC6 1860 aaPredicted RBP15.33■□□□□ 0.04
LINC01220-201ENST00000558575 NOTCH2Q04721 2471 aa15.33■□□□□ 0.04
LINC01220-201ENST00000558575 KIF26BQ2KJY2 2108 aa15.32■□□□□ 0.04
LINC01220-201ENST00000558575 TRBV5-4A0A0C4DH59 114 aa15.32■□□□□ 0.04
LINC01220-201ENST00000558575 CCDC162PA2VCL2 907 aa15.32■□□□□ 0.04
LINC01220-201ENST00000558575 OR51F1A6NGY5 319 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms