RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 CSF1P09603 554 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 HSPA1AP0DMV8 641 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 HSPA1BP0DMV9 641 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 MALP21145 153 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 ACAT1P24752 427 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 EPHB2P29323 1055 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 HNRNPH1P31943 449 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 KCNJ5P48544 419 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 GPR15P49685 360 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 AFF3P51826 1226 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 MNAT1P51948 309 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 KPNA2P52292 529 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 EPHA5P54756 1037 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 GEMP55040 296 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.21□□□□□ -1.26
MARK3-212ENST00000558223 ASPHQ12797 758 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 CDH17Q12864 832 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 SLC10A2Q12908 348 aaPredicted RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 BFSP2Q13515 415 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 BTG3Q14201 252 aaPredicted RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 LPIN1Q14693 890 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 RAB39AQ14964 217 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 SLC1A5Q15758 541 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 TRIM71Q2Q1W2 868 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 UBAP2Q5T6F2 1119 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 ZNF618Q5T7W0 954 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 GPR139Q6DWJ6 353 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 CASC4Q6P4E1 433 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 SH2D5Q6ZV89 423 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 MILR1Q7Z6M3 343 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 TMEM135Q86UB9 458 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 CRLF3Q8IUI8 442 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 ZNF276Q8N554 614 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 DTWD1Q8N5C7 304 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 CDYL2Q8N8U2 506 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 CSGALNACT1Q8TDX6 532 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 CLEC4CQ8WTT0 213 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 STON2Q8WXE9 905 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 MYLPFQ96A32 169 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 DMRTA2Q96SC8 542 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 OSBPL6Q9BZF3 934 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 OR10A4Q9H209 315 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 GBA3Q9H227 469 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 CXCL16Q9H2A7 254 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 MMADHCQ9H3L0 296 aaPredicted RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 SMOC2Q9H3U7 446 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 MRM3Q9HC36 420 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 SLC40A1Q9NP59 571 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 ENTPD7Q9NQZ7 604 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 ARHGEF3Q9NR81 526 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 PIGVQ9NUD9 493 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 TBC1D13Q9NVG8 400 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 THAP1Q9NVV9 213 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 OR12D3Q9UGF7 316 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 SRRDQ9UH36 339 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 ABT1Q9ULW3 272 aaKnown RBP7.21□□□□□ -1.26
MARK3-212ENST00000558223 SCML2Q9UQR0 700 aa7.21□□□□□ -1.26
MARK3-212ENST00000558223 C17orf113A0A1B0GUU1 675 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 CCDC78A2IDD5 438 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 CASTOR2A6NHX0 329 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 RTCAO00442 366 aaKnown RBP7.2□□□□□ -1.26
MARK3-212ENST00000558223 BTN3A1O00481 513 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 CLDN5O00501 218 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 NRP1O14786 923 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 MFSD11O43934 449 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 NRP2O60462 931 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 NEBLO76041 1014 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 BEST1O76090 585 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 IGLV3-25P01717 112 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 FYNP06241 537 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 FTH1P19P0C7X4 201 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 NQO1P15559 274 aaKnown RBP7.2□□□□□ -1.26
MARK3-212ENST00000558223 HOXB8P17481 243 aaPredicted RBP7.2□□□□□ -1.26
MARK3-212ENST00000558223 PTPN3P26045 913 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 GABRB3P28472 473 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 CD52P31358 61 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 NDST2P52849 883 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 ARFIP2P53365 341 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 ACLYP53396 1101 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 PDE1BQ01064 536 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 MC1RQ01726 317 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 CREB5Q02930 508 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 DSC1Q08554 894 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 EIF4EBP2Q13542 120 aaPredicted RBP7.2□□□□□ -1.26
MARK3-212ENST00000558223 DOC2BQ14184 412 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 NOMO2Q5JPE7 1267 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 ATPAF1Q5TC12 328 aaPredicted RBP7.2□□□□□ -1.26
MARK3-212ENST00000558223 SYPL2Q5VXT5 272 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 HLA-DQA1Q5Y7H0 255 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 STEAP3Q658P3 488 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 ANKRD34AQ69YU3 496 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 PDPK2PQ6A1A2 396 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 MSANTD2Q6P1R3 559 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 CYB5D1Q6P9G0 228 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 DENND5BQ6ZUT9 1274 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 RAPH1Q70E73 1250 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 ZNF534Q76KX8 674 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 BTN2A1Q7KYR7 527 aa7.2□□□□□ -1.26
MARK3-212ENST00000558223 NLRP9Q7RTR0 991 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms