RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 WNT3AP56704 352 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 MC2RQ01718 297 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 LLGL1Q15334 1064 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 TFDP3Q5H9I0 405 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 ZC3H18Q86VM9 953 aaKnown RBP14.42□□□□□ -0.1
SHMT2-235ENST00000557740 TRAPPC5Q8IUR0 188 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 HAUS1Q96CS2 278 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 RTP4Q96DX8 246 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 TTC25Q96NG3 672 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 VPS35Q96QK1 796 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 TRABDQ9H4I3 376 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 UCK1Q9HA47 277 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 SCHIP1Q9P0W5 487 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-235ENST00000557740 SLC23A2Q9UGH3 650 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 ZNF891A8MT65 544 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 AURKAO14965 403 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 UBXN7O94888 489 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 ANKRD34CP0C6C1 535 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 AMD1P17707 334 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 XRCC1P18887 633 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 IDSP22304 550 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 CD68P34810 354 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 HMGCLP35914 325 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 HADHBP55084 474 aaKnown RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 WASHC5Q12768 1159 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 TAZQ16635 292 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 ZDHHC20Q5W0Z9 365 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 TMEM26Q6ZUK4 368 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 KATNAL2Q8IYT4 538 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 NLGN4XQ8N0W4 816 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 SLC25A41Q8N5S1 370 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 NLGN4YQ8NFZ3 816 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 RBM41Q96IZ5 413 aaKnown RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 QKIQ96PU8 341 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 VAT1Q99536 393 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 FSD1LQ9BXM9 530 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 SLC12A9Q9BXP2 914 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 ZCCHC2Q9C0B9 1178 aaKnown RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 GOLPH3Q9H4A6 298 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 GPN2Q9H9Y4 310 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 LUC7LQ9NQ29 371 aaKnown RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 FBXO8Q9NRD0 319 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 POT1Q9NUX5 634 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 PILRAQ9UKJ1 303 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 ALG6Q9Y672 507 aa14.41□□□□□ -0.1
SHMT2-235ENST00000557740 ZFC3H1O60293 1989 aaKnown RBP14.41□□□□□ -0.1
SHMT2-235ENST00000557740 hCG_1818297A0A087WSY0 165 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 CAPN5O15484 640 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-235ENST00000557740 PPFIA2O75334 1257 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 ZRANB2O95218 330 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHMT2-235ENST00000557740 TYRP1P17643 537 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 RPL10P27635 214 aaKnown RBP14.4□□□□□ -0.1
SHMT2-235ENST00000557740 MAP4P27816 1152 aaKnown RBP14.4□□□□□ -0.1
SHMT2-235ENST00000557740 SPAM1P38567 509 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 MAGEA1P43355 309 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 GFERP55789 205 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 TBX2Q13207 712 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-235ENST00000557740 SPA17Q15506 151 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 PPP2R5EQ16537 467 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 ATP13A5Q4VNC0 1218 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 KHDC1Q4VXA5 237 aaKnown RBP14.4□□□□□ -0.1
SHMT2-235ENST00000557740 SIRPB2Q5JXA9 342 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 C11orf63Q6NUN7 778 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 BORAQ6PGQ7 559 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 KDELC1Q6UW63 502 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 PID1Q7Z2X4 250 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 GLT6D1Q7Z4J2 308 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 ZNF547Q8IVP9 402 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 RCOR2Q8IZ40 523 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 IPMKQ8NFU5 416 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 BLOC1S5Q8TDH9 187 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 CXorf40BQ96DE9 158 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 EFHD1Q9BUP0 239 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 TRIT1Q9H3H1 467 aaKnown RBP14.4□□□□□ -0.1
SHMT2-235ENST00000557740 APMAPQ9HDC9 416 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 HACD3Q9P035 362 aa14.4□□□□□ -0.1
SHMT2-235ENST00000557740 LOC285095A0A1B0GVY8 99 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 PRR19A6NJB7 356 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 HACD1B0YJ81 288 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 PYCARD-AS1I3L0S3 204 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 POLR1CO15160 346 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-235ENST00000557740 RASSF9O75901 435 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 STK17BO94768 372 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 EPOP01588 193 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 C9P02748 559 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 HLA-DPA1P20036 260 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 SLC19A1P41440 591 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 HALP42357 657 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 CHRNA4P43681 627 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 CAPZBP47756 277 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 DRG2P55039 364 aaKnown RBP14.39□□□□□ -0.11
SHMT2-235ENST00000557740 FOXM1Q08050 763 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 TMEM115Q12893 351 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-235ENST00000557740 MPP3Q13368 585 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 CLCA4Q14CN2 919 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 LDLRAP1Q5SW96 308 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 AGAP9Q5VTM2 703 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms