RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TAF8Q7Z7C8 310 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 LRRC6Q86X45 466 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 BEND7Q8N7W2 519 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 GPR150Q8NGU9 434 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 OR6P1Q8NGX9 317 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 NAT6Q93015 286 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 SIGLEC10Q96LC7 697 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 EBNA1BP2Q99848 306 aaKnown RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 TMEM168Q9H0V1 697 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A7Q9HAW7 530 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A10Q9HAW8 530 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A8Q9HAW9 530 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 WASH6PQ9NQA3 447 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 PIH1D1Q9NWS0 290 aaKnown RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 ZNHIT2Q9UHR6 403 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 TMPRSS11EQ9UL52 423 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 PNMA8BQ9ULN7 279 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 TMEM98Q9Y2Y6 226 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 ARHGEF17Q96PE2 2063 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-234ENST00000557703 LRP4O75096 1905 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 YY2O15391 372 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 FUCA1P04066 466 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 CKMT1AP12532 417 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 PNLIPP16233 465 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 ZNF7P17097 686 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-234ENST00000557703 ZNF8P17098 575 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-234ENST00000557703 PGAM1P18669 254 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 AKT1P31749 480 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 FOXN2P32314 431 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 RPL21P46778 160 aaKnown RBP13.51□□□□□ -0.25
SHMT2-234ENST00000557703 ITGA8P53708 1063 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 ADARP55265 1226 aaKnown RBP13.51□□□□□ -0.25
SHMT2-234ENST00000557703 CTBSQ01459 385 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 C2orf54Q08AI8 447 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 PTPRCAPQ14761 206 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 ANKRD20A4Q4UJ75 823 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 DOK6Q6PKX4 331 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 GATAD2AQ86YP4 633 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 RBFAQ8N0V3 343 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 ARL10Q8N8L6 244 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 WDR48Q8TAF3 677 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 STAMBPL1Q96FJ0 436 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 CLPBQ9H078 707 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 MRPL40Q9NQ50 206 aaKnown RBP13.51□□□□□ -0.25
SHMT2-234ENST00000557703 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 CATSPERZQ9NTU4 200 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 UCKL1Q9NWZ5 548 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 SYBUQ9NX95 663 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 APOBEC2Q9Y235 224 aaKnown RBP13.51□□□□□ -0.25
SHMT2-234ENST00000557703 GPSM3Q9Y4H4 160 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 RPS6KL1Q9Y6S9 549 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
SHMT2-234ENST00000557703 CCDC162PA2VCL2 907 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 ESPNB1AK53 854 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 E7ESA3 106 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 GOLGA8MH3BSY2 632 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 CD3EAPO15446 510 aaKnown RBP13.5□□□□□ -0.25
SHMT2-234ENST00000557703 SDC3O75056 442 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 AVILO75366 819 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 KCNK5O95279 499 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 GOT2P00505 430 aaKnown RBP13.5□□□□□ -0.25
SHMT2-234ENST00000557703 GIMD1P0DJR0 217 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 OGNP20774 298 aaKnown RBP13.5□□□□□ -0.25
SHMT2-234ENST00000557703 ACP1P24666 158 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 POLD2P49005 469 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 ARSDP51689 593 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 TMPRSS15P98073 1019 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 E2F1Q01094 437 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 IL9RQ01113 521 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 ZNF449Q6P9G9 518 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 CYS1Q717R9 158 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 CENPUQ71F23 418 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 TAS2R42Q7RTR8 314 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 SERPINA9Q86WD7 417 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 TRAPPC5Q8IUR0 188 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 EID2Q8N6I1 236 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 CNDP2Q96KP4 475 aaKnown RBP13.5□□□□□ -0.25
SHMT2-234ENST00000557703 ZNF778Q96MU6 729 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 TRIM51Q9BSJ1 452 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 TSSK1BQ9BXA7 367 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 TCEAL2Q9H3H9 227 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-234ENST00000557703 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 ACSL5Q9ULC5 683 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 SNX24Q9Y343 169 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
SHMT2-234ENST00000557703 KIR2DS5A0A0G2JLQ3 304 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 A0A0G2JNG1 304 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 EME2A4GXA9 379 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-234ENST00000557703 MGAT4DA6NG13 374 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 H3BMM5 538 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 KIR2DS3K7RE56 304 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 TRIM38O00635 465 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 TP73O15350 636 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 SIGLEC6O43699 453 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 VAPBO95292 243 aa13.49□□□□□ -0.25
SHMT2-234ENST00000557703 GSTA2P09210 222 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms