RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SUCOQ9UBS9 1254 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 FPGTO14772 594 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 MANFP55145 182 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 TAS2R41P59536 307 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 PEX6Q13608 980 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 RNASE12Q5GAN4 147 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 ULK3Q6PHR2 472 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 FSTL5Q8N475 847 aaPredicted RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 DQX1Q8TE96 717 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 TMEM39AQ9NV64 488 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 AKAP7Q9P0M2 348 aaPredicted RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 RAB23Q9ULC3 237 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 ERAL1O75616 437 aaKnown RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 FGBP02675 491 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 FOSL2P15408 326 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 NMBRP28336 390 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 HNF4AP41235 474 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 RGS1Q08116 209 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 HERC3Q15034 1050 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PRKD1Q15139 912 aaPredicted RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 CHSY3Q70JA7 882 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 LRP10Q7Z4F1 713 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PJA1Q8NG27 643 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 HMX1Q9NP08 348 aaPredicted RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 KIAA1522Q9P206 1035 aaPredicted RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 TBC1D3BA6NDS4 549 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 MATN2O00339 956 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 MPZL2O60487 215 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 THOP1P52888 689 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 POU5F1Q01860 360 aaKnown RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 DGKZQ13574 1117 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 KCNA10Q16322 511 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 FAM171BQ6P995 826 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PAOXQ6QHF9 649 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 DAW1Q8N136 415 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 TRPV1Q8NER1 839 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PCDH19Q8TAB3 1148 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PRKAB1Q9Y478 270 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 CHST10O43529 356 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 TYSND1Q2T9J0 566 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PRAMEF19Q5SWL8 479 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 RAB43Q86YS6 212 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 SCAIQ8N9R8 606 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 TBATAQ96M53 351 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 BHLHE41Q9C0J9 482 aaPredicted RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 SEMA3GQ9NS98 782 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF224Q9NZL3 707 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 FZD10Q9ULW2 581 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PDE10AQ9Y233 779 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 RBM7Q9Y580 266 aaKnown RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 RAI2Q9Y5P3 530 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 CLDN25C9JDP6 229 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 TNFRSF11BO00300 401 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 TP73O15350 636 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 SLC35G4P0C7Q5 338 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 PSMA1P25786 263 aaKnown RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
VTI1B-204ENST00000554659 DUSP28Q4G0W2 176 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 IQCF2Q8IXL9 164 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 SP140LQ9H930 580 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 C3orf14Q9HBI5 128 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 TRPS1Q9UHF7 1281 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 CLEC4AQ9UMR7 237 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF780BQ9Y6R6 833 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
VTI1B-204ENST00000554659 ACSL4O60488 711 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 TSPAN1O60635 241 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 MSCO60682 206 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 ASGR1P07306 291 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 FESP07332 822 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 SDC2P34741 201 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 GLUD2P49448 558 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 ARHGDIBP52566 201 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 SMCO1Q147U7 214 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 GCNT6Q5T4J0 391 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 GALNT15Q8N3T1 639 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 NAT8LQ8N9F0 302 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 SLC35B2Q8TB61 432 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 C11orf24Q96F05 449 aaPredicted RBP13.83□□□□□ -0.19
VTI1B-204ENST00000554659 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 CIDEBQ9UHD4 219 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 ASF1AQ9Y294 204 aa13.83□□□□□ -0.19
VTI1B-204ENST00000554659 C3P01024 1663 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 SCAMP3O14828 347 aaKnown RBP13.83□□□□□ -0.2
VTI1B-204ENST00000554659 TMEM63AO94886 807 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 H6PDO95479 791 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 IFNGP01579 166 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 ASLP04424 464 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 ZZZ3Q8IYH5 903 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 EZH1Q92800 747 aaPredicted RBP13.83□□□□□ -0.2
VTI1B-204ENST00000554659 NTPCRQ9BSD7 190 aaKnown RBP13.83□□□□□ -0.2
VTI1B-204ENST00000554659 COPS4Q9BT78 406 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 GULP1Q9UBP9 304 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 A0A0X1KG70 313 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 ITPKAP23677 461 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 RPS6KA3P51812 740 aa13.83□□□□□ -0.2
VTI1B-204ENST00000554659 CYP4F8P98187 520 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms