RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CHRNA4P43681 627 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 ACTR1AP61163 376 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 SARNPP82979 210 aaKnown RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 CDH17Q12864 832 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 DNAJC3Q13217 504 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 PWP1Q13610 501 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 SEPT6Q14141 434 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TCEA2Q15560 299 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TAF1AQ15573 450 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 CDKN3Q16667 212 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 FAM182AQ5T1J6 154 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 HENMT1Q5T8I9 393 aaKnown RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 DRICH1Q6PGQ1 229 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 RANBP10Q6VN20 620 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 KANSL1Q7Z3B3 1105 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TMPRSS12Q86WS5 348 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 REXO1L1PQ8IX06 675 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 CHCHD4Q8N4Q1 142 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TAB3Q8N5C8 712 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 ARL10Q8N8L6 244 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 GPR26Q8NDV2 337 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 WDR48Q8TAF3 677 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 MAPK15Q8TD08 544 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 GRK7Q8WTQ7 553 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 GLYATL1Q969I3 302 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 RTP4Q96DX8 246 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 DCUN1D1Q96GG9 259 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TTC1Q99614 292 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 FRMD8Q9BZ67 464 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TCEAL2Q9H3H9 227 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 KCNF1Q9H3M0 494 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 SYNDIG1Q9H7V2 258 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 LIN7BQ9HAP6 207 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TRIM39Q9HCM9 518 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 MRPL40Q9NQ50 206 aaKnown RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 SIRPGQ9P1W8 387 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 ZFATQ9P243 1243 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 NFKBIL1Q9UBC1 381 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 KLF15Q9UIH9 416 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 PADI4Q9UM07 663 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 SLC17A4Q9Y2C5 497 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TMEM98Q9Y2Y6 226 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 SLC30A1Q9Y6M5 507 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 CHD8Q9HCK8 2581 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 FRYLO94915 3013 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 CTAGE9A4FU28 777 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 B4DGG1 531 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 CES2O00748 559 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 VEGFDO43915 354 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 USP12O75317 370 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 CDK14O94921 469 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 METTL18O95568 372 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 AP2A1O95782 977 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 ATP1A1P05023 1023 aaKnown RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 APRTP07741 180 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 MSH3P20585 1137 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 ITGALP20701 1170 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 AKT1P31749 480 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 SOX18P35713 384 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 ADCY8P40145 1251 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 PAFAH1B1P43034 410 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 ACADVLP49748 655 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 BASP1P80723 227 aaKnown RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 TNP2Q05952 138 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 SPARCL1Q14515 664 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 OASLQ15646 514 aaKnown RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 INSCQ1MX18 579 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 SKIDA1Q1XH10 827 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 LDLRAP1Q5SW96 308 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 DHRS13Q6UX07 377 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 FAM151BQ6UXP7 276 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 RFLNAQ6ZTI6 216 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 CHST15Q7LFX5 561 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 EFL1Q7Z2Z2 1120 aaKnown RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 RAB44Q7Z6P3 723 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 SLCO6A1Q86UG4 719 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 TRIM74Q86UV6 250 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 PELI3Q8N2H9 469 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 AVL9Q8NBF6 648 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 IFI44Q8TCB0 444 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 DTX3LQ8TDB6 740 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 HEXDCQ8WVB3 486 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 MAGOHBQ96A72 148 aaKnown RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 ULK4Q96C45 1275 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 OSBPL9Q96SU4 736 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 AGAP2Q99490 1192 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 NAPGQ99747 312 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-209ENST00000553855 SCNM1Q9BWG6 230 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 TMEM168Q9H0V1 697 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 OR2AG1Q9H205 316 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 ARNT2Q9HBZ2 717 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 IL17CQ9P0M4 197 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 CRLS1Q9UJA2 301 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 SNX12Q9UMY4 172 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 NEUROG3Q9Y4Z2 214 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 SPO11Q9Y5K1 396 aa8.25□□□□□ -1.09
PSEN1-209ENST00000553855 EPG5Q9HCE0 2579 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms