RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CAPZBP47756 277 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 TPM4P67936 248 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 IFI35P80217 286 aaPredicted RBP13.36□□□□□ -0.27
TROAP-211ENST00000549891 ERV3-1Q14264 604 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 SEPT7Q16181 437 aaKnown RBP13.36□□□□□ -0.27
TROAP-211ENST00000549891 PLA2G4EQ3MJ16 856 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
TROAP-211ENST00000549891 CCDC70Q6NSX1 233 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 ABRAXAS1Q6UWZ7 409 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 WASH2PQ6VEQ5 465 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 TMC3Q7Z5M5 1100 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 PPP1R3BQ86XI6 285 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 GPR26Q8NDV2 337 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 CXorf40BQ96DE9 158 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 XPO4Q9C0E2 1151 aaKnown RBP13.36□□□□□ -0.27
TROAP-211ENST00000549891 PDE7BQ9NP56 450 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 ARFGAP3Q9NP61 516 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 WASH6PQ9NQA3 447 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 SCHIP1Q9P0W5 487 aaPredicted RBP13.36□□□□□ -0.27
TROAP-211ENST00000549891 CTTNBP2NLQ9P2B4 639 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 ZNF624Q9P2J8 865 aaPredicted RBP13.36□□□□□ -0.27
TROAP-211ENST00000549891 UVRAGQ9P2Y5 699 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 LNPEPQ9UIQ6 1025 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 PADI1Q9ULC6 663 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 PCDHGA6Q9Y5G7 932 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 GOLGA6L3A6NEY3 463 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 CDK14O94921 469 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 ZNF28P17035 718 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 HALP42357 657 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 LEPRP48357 1165 aaKnown RBP13.35□□□□□ -0.27
TROAP-211ENST00000549891 CD97P48960 835 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 SH3BP2P78314 561 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 ZBED6P86452 979 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 AP1B1Q10567 949 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 SLC10A2Q12908 348 aaPredicted RBP13.35□□□□□ -0.27
TROAP-211ENST00000549891 GTF2H3Q13889 308 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 ZNF648Q5T619 568 aaPredicted RBP13.35□□□□□ -0.27
TROAP-211ENST00000549891 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 CACHD1Q5VU97 1274 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 ASB18Q6ZVZ8 466 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 NT5DC3Q86UY8 548 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 PQLC3Q8N755 202 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.35□□□□□ -0.27
TROAP-211ENST00000549891 LRRN4Q8WUT4 740 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 CTNNBL1Q8WYA6 563 aaPredicted RBP13.35□□□□□ -0.27
TROAP-211ENST00000549891 KLHL6Q8WZ60 621 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 MIB2Q96AX9 1013 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 EID2BQ96D98 161 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 IMP4Q96G21 291 aaKnown RBP13.35□□□□□ -0.27
TROAP-211ENST00000549891 RNF157Q96PX1 679 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 TWSG1Q9GZX9 223 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 RAB33BQ9H082 229 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 CBX8Q9HC52 389 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 SLC40A1Q9NP59 571 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 EPHA6Q9UF33 1036 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 SLC23A2Q9UGH3 650 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 SHOC2Q9UQ13 582 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 PLAAQ9Y263 795 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 MAN2B2Q9Y2E5 1009 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 ZNF711Q9Y462 761 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 SLC30A1Q9Y6M5 507 aa13.35□□□□□ -0.27
TROAP-211ENST00000549891 PIPSLA2A3N6 862 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 CDC14CA4D256 554 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 C21orf140B9A014 251 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 KCNJ13O60928 360 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 SPAG6O75602 509 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 CREG1O75629 220 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 SLC4A1P02730 911 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 H2AFZP0C0S5 128 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 KDELR1P24390 212 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 RPL10P27635 214 aaKnown RBP13.34□□□□□ -0.27
TROAP-211ENST00000549891 CASP14P31944 242 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 PMS2P54278 862 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 CDK18Q07002 472 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 ZBTB17Q13105 803 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 GPR18Q14330 331 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 PDK1Q15118 436 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 SLC14A2Q15849 920 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 IRGCQ6NXR0 463 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 KLHL35Q6PF15 583 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 H2AFVQ71UI9 128 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 BPHLQ86WA6 291 aaPredicted RBP13.34□□□□□ -0.27
TROAP-211ENST00000549891 CNTD1Q8N815 330 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 BRSK1Q8TDC3 778 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 UBXN4Q92575 508 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 RSC1A1Q92681 617 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 ELMO2Q96JJ3 720 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 TTC25Q96NG3 672 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 FCRL4Q96PJ5 515 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 TRIB3Q96RU7 358 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 MAK16Q9BXY0 300 aaKnown RBP13.34□□□□□ -0.27
TROAP-211ENST00000549891 SLC25A51Q9H1U9 297 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 TMEM63CQ9P1W3 806 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 CAPN11Q9UMQ6 739 aa13.34□□□□□ -0.27
TROAP-211ENST00000549891 LUC7L2Q9Y383 392 aaKnown RBP13.34□□□□□ -0.27
TROAP-211ENST00000549891 HEY1Q9Y5J3 304 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms