RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 PRKD1Q15139 912 aaPredicted RBP9.46□□□□□ -0.89
TTC39C-203ENST00000540918 SF1Q15637 639 aaKnown RBP9.46□□□□□ -0.89
TTC39C-203ENST00000540918 RNF43Q68DV7 783 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 KIAA0930Q6ICG6 404 aaPredicted RBP9.46□□□□□ -0.89
TTC39C-203ENST00000540918 CPA6Q8N4T0 437 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 OR6Y1Q8NGX8 325 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 HERVK_113Q902F9 699 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 ACDQ96AP0 544 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 SPACA7Q96KW9 195 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 RAD18Q9NS91 495 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 TMEM248Q9NWD8 314 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 PHF24Q9UPV7 400 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 ZNF510Q9Y2H8 683 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 KCNE2Q9Y6J6 123 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.46□□□□□ -0.89
TTC39C-203ENST00000540918 FAM149AA5PLN7 773 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 LATO43561 262 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 LEFTY1O75610 366 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 GABBR2O75899 941 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 KCNA5P22460 613 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 CALRP27797 417 aaKnown RBP9.46□□□□□ -0.89
TTC39C-203ENST00000540918 HCAR3P49019 387 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 IL23RQ5VWK5 629 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 GDPD4Q6W3E5 623 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 ZBTB46Q86UZ6 589 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 HID1Q8IV36 788 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 UBR7Q8N806 425 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 IRF7Q92985 503 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 SLC25A23Q9BV35 468 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 IL23AQ9NPF7 189 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 ITM2BQ9Y287 266 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 PTGDR2Q9Y5Y4 395 aa9.46□□□□□ -0.89
TTC39C-203ENST00000540918 A0A0J9YYE9 177 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 BIRC5O15392 142 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 ETV3P41162 512 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 MBOAT1Q6ZNC8 495 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 CEP97Q8IW35 865 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 LINC01465Q8N7H1 131 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 CHST14Q8NCH0 376 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 TOP1MTQ969P6 601 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 DACT3Q96B18 629 aaPredicted RBP9.46□□□□□ -0.9
TTC39C-203ENST00000540918 C19orf60Q96EN9 201 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 NSUN3Q9H649 340 aaKnown RBP9.46□□□□□ -0.9
TTC39C-203ENST00000540918 ZNF180Q9UJW8 692 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 TNPO3Q9Y5L0 923 aaKnown RBP9.46□□□□□ -0.9
TTC39C-203ENST00000540918 SNX5Q9Y5X3 404 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 TTC3P53804 2025 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 RGSL1A5PLK6 1076 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 RGRP47804 291 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 NEK3P51956 506 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 ATP6V0D1P61421 351 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 PPP1R8Q12972 351 aaKnown RBP9.46□□□□□ -0.9
TTC39C-203ENST00000540918 CHIT1Q13231 466 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 TP53BP2Q13625 1128 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 TAF1AQ15573 450 aaPredicted RBP9.46□□□□□ -0.9
TTC39C-203ENST00000540918 MYLK3Q32MK0 819 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 FAM46CQ5VWP2 391 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 PSAPL1Q6NUJ1 521 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 ARMCX6Q7L4S7 300 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 ULK2Q8IYT8 1036 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 FAM13CQ8NE31 585 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 NSUN5Q96P11 429 aaKnown RBP9.46□□□□□ -0.9
TTC39C-203ENST00000540918 RTP3Q9BQQ7 232 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 ZDHHC2Q9UIJ5 367 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 PPM1HQ9ULR3 514 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 PLAGL1Q9UM63 463 aa9.46□□□□□ -0.9
TTC39C-203ENST00000540918 ARIH1Q9Y4X5 557 aaPredicted RBP9.46□□□□□ -0.9
TTC39C-203ENST00000540918 RFPL1O75677 317 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 FTH1P02794 183 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 SERPINA6P08185 405 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 TNNI3P19429 210 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 BMPR1AP36894 532 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 IDH3AP50213 366 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 HPCAP84074 193 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 ANO7Q6IWH7 933 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 ATG16L2Q8NAA4 619 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 ACVR1CQ8NER5 493 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 NAF1Q96HR8 494 aaKnown RBP9.45□□□□□ -0.9
TTC39C-203ENST00000540918 PNPLA8Q9NP80 782 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 KIAA1551Q9HCM1 1747 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 FAM155AB1AL88 458 aaPredicted RBP9.45□□□□□ -0.9
TTC39C-203ENST00000540918 NDUFS2O75306 463 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 OTCP00480 354 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 PRNPP04156 253 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 TRMT5Q32P41 509 aaKnown RBP9.45□□□□□ -0.9
TTC39C-203ENST00000540918 AASDHQ4L235 1098 aaPredicted RBP9.45□□□□□ -0.9
TTC39C-203ENST00000540918 ZNF542PQ5EBM4 170 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 PRAMEF14Q5SWL7 426 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 LPCAT4Q643R3 524 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 CAPRIN2Q6IMN6 1127 aaKnown RBP9.45□□□□□ -0.9
TTC39C-203ENST00000540918 SUSD1Q6UWL2 747 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 TDRPQ86YL5 185 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 ZC3H7AQ8IWR0 971 aaKnown RBP9.45□□□□□ -0.9
TTC39C-203ENST00000540918 PRSS58Q8IYP2 241 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 PHTF2Q8N3S3 785 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 OR52E6Q96RD3 313 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 BBS4Q96RK4 519 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 RMND5AQ9H871 391 aa9.45□□□□□ -0.9
TTC39C-203ENST00000540918 SGK2Q9HBY8 427 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms