RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RHOBTB2Q9BYZ6 727 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 FANCEQ9HB96 536 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 LTB4R2Q9NPC1 389 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 AGPAT4Q9NRZ5 378 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 RBM22Q9NW64 420 aaKnown RBP eCLIP5.2□□□□□ -1.58
PROM1-220ENST00000540805 NSMCE4AQ9NXX6 385 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 SMPD3Q9NY59 655 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 CD274Q9NZQ7 290 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 IFT80Q9P2H3 777 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 TRPV2Q9Y5S1 764 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CPQQ9Y646 472 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CITO14578 2027 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 SCN1AP35498 2009 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NBASA2RRP1 2371 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 EI24O14681 340 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 EIF2S1P05198 315 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 ASGR1P07306 291 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PFKMP08237 780 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SMIM10L2AP0DMW4 78 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SMIM10L2BP0DMW5 78 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 FCGR1AP12314 374 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 MATN1P21941 496 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 YWHAQP27348 245 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OR1E1P30953 314 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ATP6V1E1P36543 226 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OPRL1P41146 370 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 LSM3P62310 102 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 PWP1Q13610 501 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OXA1LQ15070 435 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PSMD5Q16401 504 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 FAM187BQ17R55 369 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SPDYE7PQ495Y7 208 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PITRM1Q5JRX3 1037 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 TJAP1Q5JTD0 557 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SNAP47Q5SQN1 464 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CCNYL2Q5T2Q4 361 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PMF1Q6P1K2 205 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ZNF773Q6PK81 442 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 KIAA1324Q6UXG2 1013 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 PIWIL4Q7Z3Z4 852 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 PIGZQ86VD9 579 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PSTKQ8IV42 348 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 LGI2Q8N0V4 545 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CCDC185Q8N715 623 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 BPIFB6Q8NFQ5 453 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SPPL2BQ8TCT7 592 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OSCP1Q8WVF1 389 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 MFSD3Q96ES6 412 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SLC45A3Q96JT2 553 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ZNF558Q96NG5 402 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 NECTIN4Q96NY8 510 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ALPK1Q96QP1 1244 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 FERD3LQ96RJ6 166 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CITED4Q96RK1 184 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ZNF347Q96SE7 839 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SH3GL1Q99961 368 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 MROQ9BYG7 248 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SEZ6LQ9BYH1 1024 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 RHOJQ9H4E5 214 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 POMKQ9H5K3 350 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 NANOGQ9H9S0 305 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ATP13A1Q9HD20 1204 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 MRPL17Q9NRX2 175 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 TBC1D13Q9NVG8 400 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 KLHL3Q9UH77 587 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PSME2Q9UL46 239 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OAZ3Q9UMX2 235 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PCDHB8Q9UN66 801 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 MTF2Q9Y483 593 aaPredicted RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 CLDN25C9JDP6 229 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 RHOBTB1O94844 696 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CXCL14O95715 111 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 AP2A1O95782 977 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SMPD1P17405 629 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 HOXC8P31273 242 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 IFNA8P32881 189 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 BCAT1P54687 386 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PRKCZQ05513 592 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 BNIP2Q12982 314 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 TUBA3CQ13748 450 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 STK11Q15831 433 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 MORN1Q5T089 497 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 BROXQ5VW32 411 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PRMT9Q6P2P2 845 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CNSTQ6PJW8 725 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 NEK10Q6ZWH5 1172 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SPATC1Q76KD6 591 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SPRED1Q7Z699 444 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SLC41A1Q8IVJ1 513 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 TAGAPQ8N103 731 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 TMEM151AQ8N4L1 468 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 RAB42Q8N4Z0 105 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PPTC7Q8NI37 304 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 EFHD2Q96C19 240 aaPredicted RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 ROPN1LQ96C74 230 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 VMP1Q96GC9 406 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 EXOC2Q96KP1 924 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CSF3RQ99062 836 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CTRCQ99895 268 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PSD2Q9BQI7 771 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms