RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SEC14L1Q92503 715 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ARRDC3Q96B67 414 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ARL8AQ96BM9 186 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 STAMBPL1Q96FJ0 436 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TRIB3Q96RU7 358 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ELF4Q99607 663 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 APOOQ9BUR5 198 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 EDEM2Q9BV94 578 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 NEUROG2Q9H2A3 272 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TNKS2Q9H2K2 1166 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MVB12BQ9H7P6 319 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CLK4Q9HAZ1 481 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FANCEQ9HB96 536 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 NOD2Q9HC29 1040 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TRIM39Q9HCM9 518 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 WASH6PQ9NQA3 447 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 NLGN3Q9NZ94 848 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 B4GALT6Q9UBX8 382 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 LNPEPQ9UIQ6 1025 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CAPN6Q9Y6Q1 641 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 DGKBQ9Y6T7 804 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MYH10P35580 1976 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MYO16Q9Y6X6 1858 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 J3KR12 359 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ADAM23O75077 832 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 RECQL5O94762 991 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SEC24DO94855 1032 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 LDOC1O95751 146 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 IL33O95760 270 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ESR1P03372 595 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TDGF1P13385 188 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 RPS3P23396 243 aaKnown RBP eCLIP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CD82P27701 267 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GPR3P46089 330 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SPINT3P49223 89 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 STK19P49842 368 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 EPHA4P54764 986 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 NXPH1P58417 271 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GPLD1P80108 840 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 HLTFQ14527 1009 aaKnown RBP eCLIP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 OASLQ15646 514 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SLC1A5Q15758 541 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 HIF1AQ16665 826 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TMEM95Q3KNT9 176 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TMEM259Q4ZIN3 620 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CCDC38Q502W7 563 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 IGSF11Q5DX21 431 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PIP5KL1Q5T9C9 394 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SH3PXD2AQ5TCZ1 1133 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TMEM164Q5U3C3 297 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 AGBL4Q5VU57 503 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 KLC3Q6P597 504 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PKN3Q6P5Z2 889 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 LINGO4Q6UY18 593 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TRMT10CQ7L0Y3 403 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GPIHBP1Q8IV16 184 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TCAIMQ8N3R3 496 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 RIBC1Q8N443 379 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ARFGAP1Q8N6T3 406 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 OR56A4Q8NGH8 313 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 OR8K5Q8NH50 307 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 BLOC1S5Q8TDH9 187 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 WBP2Q969T9 261 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 DEPDC7Q96QD5 511 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TM9SF3Q9HD45 589 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SEMA4GQ9NTN9 838 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PCMTD2Q9NV79 361 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 NLE1Q9NVX2 485 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 EPHA6Q9UF33 1036 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PILRBQ9UKJ0 227 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PYCARDQ9ULZ3 195 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PRKAB1Q9Y478 270 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TCAF1Q9Y4C2 921 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ENTPD2Q9Y5L3 495 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 A0A1B0GTQ1 180 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 LOC105371267A0A1B0GV96 52 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 PIPSLA2A3N6 862 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 CCDC151A5D8V7 595 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 FAM47DPA6NHR8 397 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 KCNK1O00180 336 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 TXNDC9O14530 226 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 TNFSF14O43557 240 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 FZD6O60353 706 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 CATP04040 527 aaKnown RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 APRTP07741 180 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 NME1P15531 152 aaKnown RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 TFE3P19532 575 aaPredicted RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 CD72P21854 359 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 CCND1P24385 295 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 EVI2BP34910 448 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 SPRP35270 261 aaPredicted RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 PIK3CGP48736 1102 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 PPM1FP49593 454 aaPredicted RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 ARL4DP49703 201 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 SEPHS1P49903 392 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 DSC2Q02487 901 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 STK11Q15831 433 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 TAF1BQ53T94 588 aaPredicted RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 CFAP157Q5JU67 520 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 ATXN7L2Q5T6C5 722 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms