RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 PRAMEF11O60813 436 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF217O75362 1048 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 TRUB2O95900 331 aaKnown RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 PRSS2P07478 247 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CCDC175P0C221 793 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 SRCP12931 536 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 GLULP15104 373 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 UGT1A1P22309 533 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 HOXA11P31270 313 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CLDN20P56880 219 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 SNRPEP62304 92 aaKnown RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 Q0VFX4 171 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 RALGDSQ12967 914 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 COG2Q14746 738 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 HLFQ16534 295 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 SYT16Q17RD7 645 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CCDC142Q17RM4 750 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 LEXMQ3ZCV2 418 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CBWD6Q4V339 395 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CBWD3Q5JTY5 395 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 COLEC12Q5KU26 742 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 FAM69BQ5VUD6 431 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 ALS2CLQ60I27 953 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 BRAT1Q6PJG6 821 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CCNI2Q6ZMN8 369 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 ANKRD23Q86SG2 305 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 IQCHQ86VS3 1027 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CEP57Q86XR8 500 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 GALNT13Q8IUC8 556 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CHERPQ8IWX8 916 aaKnown RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 PM20D2Q8IYS1 436 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 PGBD5Q8N414 524 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 SLC5A8Q8N695 610 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 CFAP61Q8NHU2 1237 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 PPP4R1Q8TF05 950 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 SLC44A1Q8WWI5 657 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 SIPA1Q96FS4 1042 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 QRFPRQ96P65 431 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 PPIL3Q9H2H8 161 aaKnown RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 OPA3Q9H6K4 179 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 WDR26Q9H7D7 661 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 MCM9Q9NXL9 1143 aa5.31□□□□□ -1.56
PRKDC-208ENST00000536710 DDX25Q9UHL0 483 aaKnown RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 NOL7Q9UMY1 257 aaKnown RBP5.31□□□□□ -1.56
PRKDC-208ENST00000536710 A0A0U1RQJ8 604 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 EDDM13A0A1B0GTR0 161 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GAGE7O76087 117 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GAGE12FP0CL80 117 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GAGE12GP0CL81 117 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GAGE12IP0CL82 117 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 IGHV4-30-4P0DP06 118 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 FBLP22087 321 aaKnown RBP5.3□□□□□ -1.56
PRKDC-208ENST00000536710 NR2F2P24468 414 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 ITGB8P26012 769 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 PGGT1BP53609 377 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 TERF1P54274 439 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 ROR1Q01973 937 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GAGE1Q13065 139 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GAGE4Q13068 117 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 TNIP1Q15025 636 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 TWIST1Q15672 202 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 CALCRLQ16602 461 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 CST9LP1Q5W188 147 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 LCN10Q6JVE6 187 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 C8orf82Q6P1X6 216 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF549Q6P9A3 640 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 TEX38Q6PEX7 206 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 CCDC186Q7Z3E2 898 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GALNTL5Q7Z4T8 443 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 MAP7D3Q8IWC1 876 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 ADHFE1Q8IWW8 467 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF34Q8IZ26 560 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 Q8NFD4 153 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 WDR20Q8TBZ3 569 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 MAGEC3Q8TD91 643 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 ZFAND2BQ8WV99 257 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 NXNL1Q96CM4 212 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF830Q96NB3 372 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GBP5Q96PP8 586 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 PCYT2Q99447 389 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 GFI1Q99684 422 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 SPRY4Q9C004 299 aa5.3□□□□□ -1.56
PRKDC-208ENST00000536710 MRPL44Q9H9J2 332 aaKnown RBP5.3□□□□□ -1.56
PRKDC-208ENST00000536710 TRMT1Q9NXH9 659 aaKnown RBP5.3□□□□□ -1.56
PRKDC-208ENST00000536710 WBP11Q9Y2W2 641 aaKnown RBP5.3□□□□□ -1.56
PRKDC-208ENST00000536710 A0A0B4J293 547 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 PLK4O00444 970 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 DDNO94850 711 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-208ENST00000536710 TOMM40O96008 361 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 QDPRP09417 244 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 HOXC6P09630 235 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 PFKFB1P16118 471 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 ERCC2P18074 760 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 KCNA5P22460 613 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 GABRA5P31644 462 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 ARRB2P32121 409 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 PEX5P50542 639 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF41P51814 821 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-208ENST00000536710 COG7P83436 770 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms