RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MIB1Q86YT6 1006 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 DBF4BQ8NFT6 615 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 TP53INP1Q96A56 240 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 RPL10LQ96L21 214 aaKnown RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 YME1L1Q96TA2 773 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 AGAP2Q99490 1192 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 CLSTN3Q9BQT9 956 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ZNF717Q9BY31 904 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 ATXN3LQ9H3M9 355 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 TMEM233B4DJY2 109 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 KCNK2O95069 426 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 INHAP05111 366 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 SPNP16150 400 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 HTR1BP28222 390 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 CCR1P32246 355 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ARHGEF6Q15052 776 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 CTXN3Q4LDR2 81 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 PAGE2Q7Z2X7 111 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 MFSD4AQ8N468 514 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 SEZ6LQ9BYH1 1024 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ZDHHC2Q9UIJ5 367 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ZNF221Q9UK13 617 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 PCDHB8Q9UN66 801 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 DHRS12A0PJE2 317 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 MEN1O00255 615 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 NCAM2O15394 837 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CABYRO75952 493 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 SEC24AO95486 1093 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 AP2A1O95782 977 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 IL7RP16871 459 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CNTFP26441 200 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 HOXD10P28358 340 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 HCAR3P49019 387 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 NAGLUP54802 743 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 NKX3-2P78367 333 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 IRF9Q00978 393 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CDONQ4KMG0 1287 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 AASDHQ4L235 1098 aaPredicted RBP13.86□□□□□ -0.19
LIG1-203ENST00000536218 VARS2Q5ST30 1063 aaKnown RBP13.86□□□□□ -0.19
LIG1-203ENST00000536218 GTF2IRD2BQ6EKJ0 949 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 XAF1Q6GPH4 301 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 DESI1Q6ICB0 168 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 NEK10Q6ZWH5 1172 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 GTF2IRD2Q86UP8 949 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 COLGALT2Q8IYK4 626 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 NDNFQ8TB73 568 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
LIG1-203ENST00000536218 RETREG1Q9H6L5 497 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CAB39LQ9H9S4 337 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 TDRD15B5MCY1 1934 aaKnown RBP13.86□□□□□ -0.19
LIG1-203ENST00000536218 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CD40LGP29965 261 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 PGGT1BP53609 377 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 EFEMP1Q12805 493 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 ILF2Q12905 390 aaKnown RBP13.86□□□□□ -0.19
LIG1-203ENST00000536218 CYBRD1Q53TN4 286 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 FAM26DQ5JW98 314 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 C6orf10Q5SRN2 563 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 INTS11Q5TA45 600 aaKnown RBP13.86□□□□□ -0.19
LIG1-203ENST00000536218 CMTR2Q8IYT2 770 aaKnown RBP13.86□□□□□ -0.19
LIG1-203ENST00000536218 ATPAF2Q8N5M1 289 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 PACRGLQ8N7B6 248 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CCNYL1Q8N7R7 359 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 LSMEM1Q8N8F7 131 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 IPMKQ8NFU5 416 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CERS2Q96G23 380 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 MAP6Q96JE9 813 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 GPR62Q9BZJ7 368 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 SLC39A8Q9C0K1 460 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CPNE5Q9HCH3 593 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 CD320Q9NPF0 282 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 SNX15Q9NRS6 342 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 STMN3Q9NZ72 180 aa13.86□□□□□ -0.19
LIG1-203ENST00000536218 PTGES3LE9PB15 166 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 GRID2O43424 1007 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 ALBP02768 609 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 TYMPP19971 482 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 RPS9P46781 194 aaKnown RBP13.85□□□□□ -0.19
LIG1-203ENST00000536218 GALK2Q01415 458 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 CATSPEREQ5SY80 951 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 TRAF7Q6Q0C0 670 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 SPATC1Q76KD6 591 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 R3HCC1LQ7Z5L2 792 aaKnown RBP13.85□□□□□ -0.19
LIG1-203ENST00000536218 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.85□□□□□ -0.19
LIG1-203ENST00000536218 CNDP2Q96KP4 475 aaKnown RBP13.85□□□□□ -0.19
LIG1-203ENST00000536218 TEKT5Q96M29 485 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 EIF2B3Q9NR50 452 aaKnown RBP13.85□□□□□ -0.19
LIG1-203ENST00000536218 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 FKBP14Q9NWM8 211 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 GMIPQ9P107 970 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 PMPCBO75439 489 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 EOMESO95936 686 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 MT-CO1P00395 513 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 CPB1P15086 417 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 GRIA4P48058 902 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 GLRBP48167 497 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 STX5Q13190 355 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 REP15Q6BDI9 236 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 CYP20A1Q6UW02 462 aa13.85□□□□□ -0.19
LIG1-203ENST00000536218 LINC00523Q86TU6 105 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms