RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 SLC25A51Q9H1U9 297 aa13.77□□□□□ -0.2
LPCAT3-203ENST00000535479 LIMD1Q9UGP4 676 aa13.77□□□□□ -0.2
LPCAT3-203ENST00000535479 FKBPLQ9UIM3 349 aa13.77□□□□□ -0.2
LPCAT3-203ENST00000535479 COL1A2P08123 1366 aa13.77□□□□□ -0.2
LPCAT3-203ENST00000535479 GNGT2O14610 69 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 LDLRP01130 860 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 HCAR3P49019 387 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 DGKEP52429 567 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 RAD23AP54725 363 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TBX4P57082 545 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 OCA2Q04671 838 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 SIM2Q14190 667 aaPredicted RBP13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 ZNF235Q14590 738 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 SF1Q15637 639 aaKnown RBP13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 ATP6AP1Q15904 470 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 LETMD1Q6P1Q0 360 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TXNDC11Q6PKC3 985 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 ABRAXAS1Q6UWZ7 409 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TMEM179BQ7Z7N9 219 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TRPV3Q8NET8 790 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 CDC26Q8NHZ8 85 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 ARRDC2Q8TBH0 407 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 ADAM2Q99965 735 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TOR3AQ9H497 397 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 WDR70Q9NW82 654 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 MED16Q9Y2X0 877 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 PCDHA9Q9Y5H5 950 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 MICAL3Q7RTP6 2002 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TMEM247A6NEH6 219 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 MYF6P23409 242 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 PCSK1P29120 753 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 RFC2P35250 354 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 MTHFRP42898 656 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 OR1G1P47890 313 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 POLR2JP52435 117 aaKnown RBP13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TRIM32Q13049 653 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 AQP6Q13520 282 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 NR6A1Q15406 480 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 SMN1Q16637 294 aaKnown RBP13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 RFTN2Q52LD8 501 aaPredicted RBP13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 GRAMD4Q6IC98 578 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 BLOC1S3Q6QNY0 202 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 BBS5Q8N3I7 341 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 TMCO5AQ8N6Q1 288 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 OR4L1Q8NH43 312 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 ACDQ96AP0 544 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 ATOH8Q96SQ7 321 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 PLGRKTQ9HBL7 147 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 CATSPERZQ9NTU4 200 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 COQ6Q9Y2Z9 468 aa13.77□□□□□ -0.21
LPCAT3-203ENST00000535479 HS6ST1O60243 411 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 SNX2O60749 519 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 SLC22A3O75751 556 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 CAPN15O75808 1086 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 CAPN1P07384 714 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 ABCB1P08183 1280 aaPredicted RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 FMO3P31513 532 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 CAPGP40121 348 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 GATMP50440 423 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 KPNA2P52292 529 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 TRAP1Q12931 704 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 CTU2Q2VPK5 515 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 RAB44Q7Z6P3 723 aaPredicted RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 PLEKHH3Q7Z736 793 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 LINGO1Q96FE5 620 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 NTN4Q9HB63 628 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 PCDHGA8Q9Y5G5 932 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 GPR45Q9Y5Y3 372 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 EYSQ5T1H1 3165 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 MBLAC1A4D2B0 266 aaPredicted RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 ADSLP30566 484 aaPredicted RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 ZFP36L2P47974 494 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 MLLT6P55198 1093 aaPredicted RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 NFATC3Q12968 1075 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 MADCAM1Q13477 382 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 SPIDRQ14159 915 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 GCNT7Q6ZNI0 430 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 DCP1BQ8IZD4 617 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 MDGA1Q8NFP4 955 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 PNPT1Q8TCS8 783 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 SLC22A17Q8WUG5 538 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 SEPT8Q92599 483 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 TSGA13Q96PP4 275 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 CCDC68Q9H2F9 335 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 HIPK3Q9H422 1215 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 AMBNQ9NP70 447 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 VAPAQ9P0L0 249 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 SARDHQ9UL12 918 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 PADI3Q9ULW8 664 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
LPCAT3-203ENST00000535479 SH3PXD2BA1X283 911 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 CBX4O00257 560 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ADAM23O75077 832 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms