RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 AAMDCQ9H7C9 122 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 DNAJC18Q9H819 358 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 MKKSQ9NPJ1 570 aaPredicted RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 HINT3Q9NQE9 182 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 CYSLTR2Q9NS75 346 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 TMEM45AQ9NWC5 275 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 CHCHD3Q9NX63 227 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 DDX43Q9NXZ2 648 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 COQ3Q9NZJ6 369 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 LARSQ9P2J5 1176 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 TSPYL4Q9UJ04 414 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 LIPGQ9Y5X9 500 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.39□□□□□ -1.71
USP47-211ENST00000531513 TTC3P53804 2025 aa4.39□□□□□ -1.71
USP47-211ENST00000531513 ABCC9O60706 1549 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 KANSL1LA0AUZ9 987 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 CPED1A4D0V7 1026 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 GTPBP10A4D1E9 387 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 EME2A4GXA9 379 aaPredicted RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 CCDC188H7C350 402 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 HTATSF1O43719 755 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 SLC28A2O43868 658 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 NDUFB4O95168 129 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 ZWINTO95229 277 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 SIX3O95343 332 aaPredicted RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 CLDN7O95471 211 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 ACHEP22303 614 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 CLK1P49759 484 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 METAP2P50579 478 aaKnown RBP eCLIP4.38□□□□□ -1.71
USP47-211ENST00000531513 CAPZA1P52907 286 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 CDH13P55290 713 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 ZXDBP98169 803 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 UBXN1Q04323 297 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 SPOCK1Q08629 439 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 SREBF2Q12772 1141 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 GRIK2Q13002 908 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 KRTAP27-1Q3LI81 207 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 TMEM211Q6ICI0 200 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 HEPHL1Q6MZM0 1159 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 ANKRD54Q6NXT1 300 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 TMEM71Q6P5X7 295 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 FAM43BQ6ZT52 329 aaPredicted RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 MSANTD1Q6ZTZ1 278 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 MTSS1LQ765P7 747 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 HAUS6Q7Z4H7 955 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 SFTPA2Q8IWL1 248 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 FAM217AQ8IXS0 508 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 CCAR2Q8N163 923 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 NDUFAF2Q8N183 169 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 SPATA6LQ8N4H0 392 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 SCCPDHQ8NBX0 429 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 AGBL3Q8NEM8 1001 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 GRK7Q8WTQ7 553 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 ASB5Q8WWX0 329 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 SLC25A28Q96A46 364 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 TMEM18Q96B42 140 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 MSI2Q96DH6 328 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 SPACA9Q96E40 222 aaPredicted RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 ZNF479Q96JC4 524 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 FERMT1Q9BQL6 677 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 WDR83Q9BRX9 315 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 MSTO1Q9BUK6 570 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 FUT8Q9BYC5 575 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 MMADHCQ9H3L0 296 aaPredicted RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 MAGIXQ9H6Y5 334 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 NOL11Q9H8H0 719 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 ANKZF1Q9H8Y5 726 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 CISD1Q9NZ45 108 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 AGO2Q9UKV8 859 aaKnown RBP4.38□□□□□ -1.71
USP47-211ENST00000531513 KLHL20Q9Y2M5 609 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 STON1Q9Y6Q2 735 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 ZNF541Q9H0D2 1346 aa4.38□□□□□ -1.71
USP47-211ENST00000531513 TRBV5-3A0A0A0MS03 114 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 ANXA2P2A6NMY6 339 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 ZNF814B7Z6K7 855 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 F8W810 466 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 H0YIN7 160 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 CELF2O95319 508 aaKnown RBP4.37□□□□□ -1.71
USP47-211ENST00000531513 GH2P01242 217 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 LINGO3P0C6S8 592 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 PLA2G2AP14555 144 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 PFKFB1P16118 471 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 STMN1P16949 149 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 CD58P19256 250 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 CASTP20810 708 aaKnown RBP4.37□□□□□ -1.71
USP47-211ENST00000531513 UBA1P22314 1058 aaKnown RBP4.37□□□□□ -1.71
USP47-211ENST00000531513 MYF6P23409 242 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 TMPRSS3P57727 454 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 TUBB4BP68371 445 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 C17orf67Q0P5P2 114 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 PTK6Q13882 451 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 NEDD9Q14511 834 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 TYSND1Q2T9J0 566 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 PRTGQ2VWP7 1150 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 DCAF6Q58WW2 860 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 ZRANB3Q5FWF4 1079 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 NHSL2Q5HYW2 709 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 GGNBP1Q5YKI7 109 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
USP47-211ENST00000531513 METTL2BQ6P1Q9 378 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms