RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 ACRV1P26436 265 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 GNPDA1P46926 289 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ARCN1P48444 511 aaKnown RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 PRLHRP49683 370 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CDKN1CP49918 316 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CLCNKAP51800 687 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CTSCP53634 463 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 DRG2P55039 364 aaKnown RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 PRAMEP78395 509 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 MRPS25P82663 173 aaKnown RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CTBSQ01459 385 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 TMEM115Q12893 351 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ILF3Q12906 894 aaKnown RBP eCLIP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 C1orf61Q13536 156 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 SEMA3AQ14563 771 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ITIH4Q14624 930 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 DBN1Q16643 649 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 HIF1AQ16665 826 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 TYSND1Q2T9J0 566 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 DEFB133Q30KQ1 61 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 BCL7AQ4VC05 210 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 MSS51Q4VC12 460 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 FNBP1LQ5T0N5 605 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 C6orf132Q5T0Z8 1188 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ZNF648Q5T619 568 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ZCCHC8Q6NZY4 707 aaKnown RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 C8orf74Q6P047 294 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 LVRNQ6Q4G3 990 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 XKR5Q6UX68 686 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 PACS1Q6VY07 963 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 MARK2Q7KZI7 788 aaKnown RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 RD3Q7Z3Z2 195 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CTAGE6Q86UF2 777 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 LRRTM4Q86VH4 590 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 SERPINA9Q86WD7 417 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 C17orf82Q86X59 251 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 GKN2Q86XP6 184 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CTAGE4Q8IX94 777 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 PDIK1LQ8N165 341 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 EID2Q8N6I1 236 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CEP112Q8N8E3 955 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 RASGEF1AQ8N9B8 481 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 BBOF1Q8ND07 529 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 MNS1Q8NEH6 495 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 DEFB124Q8NES8 71 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 OR4L1Q8NH43 312 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CCL4L1Q8NHW4 92 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 GDAP1Q8TB36 358 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 LMX1AQ8TE12 382 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 RHBDD1Q8TEB9 315 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 HDAC10Q969S8 669 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 LRRC39Q96DD0 335 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 MFSD3Q96ES6 412 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CCDC97Q96F63 343 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 STAMBPL1Q96FJ0 436 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ZNF514Q96K75 400 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CAMK1GQ96NX5 476 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 FCRL3Q96P31 734 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 COPS8Q99627 209 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 DUSP23Q9BVJ7 150 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 GSDMCQ9BYG8 508 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 TRIM31Q9BZY9 425 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 PHACTR1Q9C0D0 580 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 RAB17Q9H0T7 212 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 DPH5Q9H2P9 285 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 PLAC1Q9HBJ0 212 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 TOR4AQ9NXH8 423 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ZDHHC3Q9NYG2 299 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 SAMD15Q9P1V8 674 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 MARCH4Q9P2E8 410 aaPredicted RBP5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 GULP1Q9UBP9 304 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 CRLS1Q9UJA2 301 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 MOSPD1Q9UJG1 213 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 ANAPC5Q9UJX4 755 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 GPR34Q9UPC5 381 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 SNX24Q9Y343 169 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 U3KQA8 63 aa5.59□□□□□ -1.51
RPUSD4-204ENST00000530036 UNC13CQ8NB66 2214 aa5.59□□□□□ -1.52
RPUSD4-204ENST00000530036 DCDC2BA2VCK2 349 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 KLHL33A6NCF5 533 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 GIPC1O14908 333 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 KMOO15229 486 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 CD3EAPO15446 510 aaKnown RBP5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 GRID2O43424 1007 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 NOBOXO60393 691 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 KCNK5O95279 499 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 VAPBO95292 243 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 TTC4O95801 387 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 POLBP06746 335 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 ANXA6P08133 673 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 ALPPL2P10696 532 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 CKMT1AP12532 417 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 ACP5P13686 325 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 ATP1B2P14415 290 aaPredicted RBP5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 ZNF7P17097 686 aaPredicted RBP5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 PGAM1P18669 254 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 PAMP19021 973 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 MSH3P20585 1137 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 ACP1P24666 158 aa5.58□□□□□ -1.52
RPUSD4-204ENST00000530036 AK4P27144 223 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms