RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RDXP35241 583 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 GNL1P36915 607 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ANXA11P50995 505 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF75DP51815 510 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 JAK3P52333 1124 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 SIRPAP78324 504 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 RAE1P78406 368 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 SORDQ00796 357 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TNFRSF17Q02223 184 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TAP2Q03519 686 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCDC15Q0P6D6 951 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 DYRK1AQ13627 763 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 DPYSL2Q16555 572 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CDO1Q16878 200 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 USP41Q3LFD5 358 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PMF1Q6P1K2 205 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARSKQ6UWY0 536 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TMPRSS9Q7Z410 1059 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CLNKQ7Z7G1 428 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 EXOC3L1Q86VI1 746 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PHC2Q8IXK0 858 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 HACE1Q8IYU2 909 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADGRF3Q8IZF5 1079 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TTC5Q8N0Z6 440 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF808Q8N4W9 903 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 KYQ8NBH2 561 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADPRHL1Q8NDY3 354 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 AKR7LQ8NHP1 331 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 RABGGTAQ92696 567 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 RIT1Q92963 219 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM136AQ96C01 138 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 R3HDM4Q96D70 268 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 MSI2Q96DH6 328 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 SNRNP40Q96DI7 357 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 BORCS6Q96GS4 357 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM81BQ96LP2 452 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 GPR78Q96P69 363 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PANX3Q96QZ0 392 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PCYT2Q99447 389 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADAM2Q99965 735 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CINPQ9BW66 212 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF416Q9BWM5 594 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 GPR61Q9BZJ8 451 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 AMBRA1Q9C0C7 1298 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 LSG1Q9H089 658 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 WNT5BQ9H1J7 359 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PPIL3Q9H2H8 161 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 FN3KQ9H479 309 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CHMP1AQ9HD42 196 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 BPIFA1Q9NP55 256 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 HPS4Q9NQG7 708 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 KLC4Q9NSK0 619 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ABHD10Q9NUJ1 306 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 GDAP2Q9NXN4 497 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TAS2R14Q9NYV8 317 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARPP21Q9UBL0 812 aaPredicted RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 IPO11Q9UI26 975 aaKnown RBP3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CDC14AQ9UNH5 594 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 ICKQ9UPZ9 632 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 EXOC6BQ9Y2D4 811 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 CARD8Q9Y2G2 431 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 DLGAP4Q9Y2H0 992 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 PMF1-BGLAPU3KQ54 211 aa3.92□□□□□ -1.78
RNU4-60P-201ENST00000517239 TNIKQ9UKE5 1360 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM230AA0A1W2PPH8 454 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 HNRNPCL2B2RXH8 293 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 KLRF2D3W0D1 207 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 CACNG3O60359 315 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PRAMEF2O60811 474 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 CIB2O75838 187 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 GLCEO94923 617 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 TJP3O95049 919 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PGLSO95336 258 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 VNN2O95498 520 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 STAMBPO95630 424 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 S100A9P06702 114 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PGK2P07205 417 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 CD8BP10966 210 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ITGB5P18084 799 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 MATN1P21941 496 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PAX7P23759 505 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ACAT1P24752 427 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 DUSP1P28562 367 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PTPN6P29350 595 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 TKTP29401 623 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PKLRP30613 574 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCT6AP40227 531 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR1G1P47890 313 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 GPR143P51810 404 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 HNRNPFP52597 415 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADPRHP54922 357 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ACTR3P61158 418 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 FOLH1Q04609 750 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 HGFACQ04756 655 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PPP1R8Q12972 351 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 HSPB3Q12988 150 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 GRIK3Q13003 919 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 TNK1Q13470 666 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms