RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 NKAPQ8N5F7 415 aaKnown RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TMEM217Q8N7C4 229 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SPANXA2-OT1Q8N9U9 137 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 C11orf45Q8TAV5 145 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 OTUD7AQ8TE49 926 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TBC1D22AQ8WUA7 517 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 NSMAFQ92636 917 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TMEM143Q96AN5 459 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TVP23CQ96ET8 276 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SPATA17Q96L03 361 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GPR101Q96P66 508 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SIGLEC12Q96PQ1 595 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FRG2BQ96QU4 278 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HIST1H2AAQ96QV6 131 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DNAJC2Q99543 621 aaKnown RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FEZ1Q99689 392 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MAP3K3Q99759 626 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CMKLR1Q99788 373 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CLSTN3Q9BQT9 956 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RHNO1Q9BSD3 238 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TDRD1Q9BXT4 1180 aaKnown RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 BACH2Q9BYV9 841 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LRRCC1Q9C099 1032 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GLT8D2Q9H1C3 349 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SPNS1Q9H2V7 528 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF442Q9H7R0 627 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SFXN1Q9H9B4 322 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 XPNPEP3Q9NQH7 507 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DDX4Q9NQI0 724 aaKnown RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ST7Q9NRC1 585 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 METTL5Q9NRN9 209 aaKnown RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ECHDC1Q9NTX5 307 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SLC2A8Q9NY64 477 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 OPN4Q9UHM6 478 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FEZ2Q9UHY8 353 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CDH22Q9UJ99 828 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RABGAP1Q9Y3P9 1069 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ANGPTL3Q9Y5C1 460 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PDZD2O15018 2839 aa-0.83□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HYDINQ4G0P3 5121 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ABCA2Q9BZC7 2435 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 WASHC2CQ9Y4E1 1318 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 NF1P21359 2839 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RYR1P21817 5038 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IGLV4-69A0A075B6H9 119 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IGKV1D-37A0A075B6S9 117 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CCDC163A0A0D9SF12 145 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MSGN1A6NI15 193 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 B4DXG7 233 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 H0YIN7 160 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF195O14628 629 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 EMC8O43402 210 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RRP9O43818 475 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SRPX2O60687 465 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DTNBO60941 627 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PIAS2O75928 621 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CSPG5O95196 566 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 KAT7O95251 611 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CCNDBP1O95273 360 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ALDOCP09972 364 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CISD3P0C7P0 127 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HARSP12081 509 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DDX5P17844 614 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IGFBP2P18065 325 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 POLR2CP19387 275 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GLRA1P23415 457 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 NTSR1P30989 418 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ELF1P32519 619 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GPR12P47775 334 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MT4P47944 62 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF83P51522 516 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 EFNA3P52797 238 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SUCLG1P53597 346 aaKnown RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CTSCP53634 463 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PAX9P55771 341 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HDAC4P56524 1084 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CACNG7P62955 275 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DEFB103AP81534 67 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FANCCQ00597 558 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MBTD1Q05BQ5 628 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IL10RAQ13651 578 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LPIN1Q14693 890 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LTB4RQ15722 352 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CNGA2Q16280 664 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MS4A18Q3C1V0 323 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 C5orf22Q49AR2 442 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ABCA11PQ4W5N1 156 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TMEM35AQ53FP2 167 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF789Q5FWF6 425 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DCST2Q5T1A1 773 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FAM171A1Q5VUB5 890 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FRG2Q64ET8 278 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TTI2Q6NXR4 508 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF704Q6ZNC4 412 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TMUB2Q71RG4 321 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 KCTD20Q7Z5Y7 419 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TTC7BQ86TV6 843 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TRIM74Q86UV6 250 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TRIM73Q86UV7 250 aa-0.84□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PPP1R3BQ86XI6 285 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms