RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PSMD9O00233 223 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TREHO43280 583 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 DYRK3O43781 588 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GMDSO60547 372 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 MT-ND3P03897 115 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PRKAR1AP10644 381 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CSF2RAP15509 400 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PRKCHP24723 683 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ADORA2BP29275 332 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CAPZA1P52907 286 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 XIAPP98170 497 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 APOFQ13790 326 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM110CQ1W6H9 321 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 STXBP5Q5T5C0 1151 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC16A12Q6ZSM3 486 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CDHR3Q6ZTQ4 885 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PHC2Q8IXK0 858 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CPNE9Q8IYJ1 553 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CLYBLQ8N0X4 340 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TRPV3Q8NET8 790 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 METTL6Q8TCB7 284 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM161BQ96MY7 647 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 BTBD10Q9BSF8 475 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF408Q9H9D4 720 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 COG4Q9H9E3 785 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 KLK14Q9P0G3 267 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 KLQ9UEF7 1012 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SEPT3Q9UH03 358 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 EBF1Q9UH73 591 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 UBQLN1Q9UMX0 589 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ST14Q9Y5Y6 855 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 HTTP42858 3142 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TDRD15B5MCY1 1934 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 A0A0G2JND7 137 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 KPNA7A9QM74 516 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GIPC1O14908 333 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GSC2O15499 205 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 NOL3O60936 208 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 INHBBP09529 407 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 KCNE1P15382 129 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 DDCP20711 480 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TKTL1P51854 596 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 BCAT1P54687 386 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 AP1S2P56377 157 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CARD18P57730 90 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 KCNJ10P78508 379 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF200P98182 395 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 BNIP3Q12983 259 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 CHAF1BQ13112 559 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 DNASE1L3Q13609 305 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SMAD1Q15797 465 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 FBXO48Q5FWF7 155 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 LPCAT4Q643R3 524 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 LIN54Q6MZP7 749 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ATG14Q6ZNE5 492 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PLEKHH3Q7Z736 793 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ADGRG2Q8IZP9 1017 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PYROXD2Q8N2H3 581 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 MPP5Q8N3R9 675 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 DNAAF3Q8N9W5 541 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC2A14Q8TDB8 520 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 DNAJB3Q8WWF6 145 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC22A18Q96BI1 424 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ZDHHC12Q96GR4 267 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 APOPT1Q96IL0 206 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TXNDC15Q96J42 360 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SIGLEC10Q96LC7 697 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 QKIQ96PU8 341 aaKnown RBP eCLIP7.42□□□□□ -1.222e-9■■■■■ 73.6
PDLIM5-219ENST00000514743 CSPG4P5Q96PW8 444 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SNX18Q96RF0 628 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 BCL7BQ9BQE9 202 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TRAF4Q9BUZ4 470 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SLA2Q9H6Q3 261 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 IFT46Q9NQC8 304 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PPARGC1AQ9UBK2 798 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ZFP69BQ9UJL9 534 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 RPS6KA6Q9UK32 745 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PPM1HQ9ULR3 514 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 AP4E1Q9UPM8 1137 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 HMX2A2RU54 273 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ARGFXA6NJG6 315 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GCATO75600 419 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SPAG6O75602 509 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 BEST1O76090 585 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 FABP1P07148 127 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF865P0CJ78 1059 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PRG2P13727 222 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 LCP1P13796 627 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 MAP4P27816 1152 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GDI1P31150 447 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GRIA1P42261 906 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 PITX1P78337 314 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 GUCA2AQ02747 115 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ZBTB16Q05516 673 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 RAPSNQ13702 412 aa7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF267Q14586 743 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 TAF1BQ53T94 588 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC45A4Q5BKX6 768 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms