RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 MSX2P35548 267 aaPredicted RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 SLC7A2P52569 658 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 EPHB3P54753 998 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 KCNK10P57789 538 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 ARF5P84085 180 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 TRAF2Q12933 501 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 ADRM1Q16186 407 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 RBBP7Q16576 425 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 LIN52Q52LA3 116 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 ARMC12Q5T9G4 340 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 RNF220Q5VTB9 566 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 CXorf57Q6NSI4 855 aaKnown RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 RETSATQ6NUM9 610 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 UGT2A3Q6UWM9 527 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 LAYNQ6UX15 382 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 FRA10AC1Q70Z53 315 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 DNAJB7Q7Z6W7 309 aaPredicted RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 ITIH5Q86UX2 942 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 TICAM1Q8IUC6 712 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 AQP12AQ8IXF9 295 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 AUTS2Q8WXX7 1259 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 FUBP1Q96AE4 644 aaKnown RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 EME1Q96AY2 570 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 LINGO1Q96FE5 620 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 PDLIM5Q96HC4 596 aaKnown RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 C3orf30Q96M34 536 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 KLHL32Q96NJ5 620 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 TCF25Q9BQ70 676 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 LMAN2LQ9H0V9 348 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 PRO3102Q9H379 93 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 MAGEE1Q9HCI5 957 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 FBRSL1Q9HCM7 1045 aaKnown RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 SEMA4BQ9NPR2 832 aaPredicted RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 SDR39U1Q9NRG7 319 aaPredicted RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 PLK2Q9NYY3 685 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 LSM7Q9UK45 103 aaKnown RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 ZNF510Q9Y2H8 683 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 YBX2Q9Y2T7 364 aaKnown RBP9.35□□□□□ -0.91
SUB1-209ENST00000511615 ACTL7AQ9Y615 435 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 AP4B1Q9Y6B7 739 aa9.35□□□□□ -0.91
SUB1-209ENST00000511615 C15orf38-AP3S2A0A0A6YYH1 394 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 KANSL1LA0AUZ9 987 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PRORSD1PA6NEY8 169 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 CDC7O00311 574 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PRRG1O14668 218 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PRMT5O14744 637 aaPredicted RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 GRM6O15303 877 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 DNAJA2O60884 412 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 RNASEH2AO75792 299 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 TNFAIP8O95379 198 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 MT-CO1P00395 513 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 POU2F2P09086 479 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 LINC00032P0C843 101 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PRSS56P0CW18 603 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 HSD17B1P14061 328 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 IL10P22301 178 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 HOXA9P31269 272 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 RGS4P49798 205 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 SMAD3P84022 425 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 RAB30Q15771 203 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PDCD4Q53EL6 469 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 SETMARQ53H47 684 aaPredicted RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 IL23RQ5VWK5 629 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PTRHD1Q6GMV3 140 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 CYHR1Q6ZMK1 362 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 CCDC149Q6ZUS6 474 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 GPRIN3Q6ZVF9 776 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 ARPINQ7Z6K5 226 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 ADAMTSL2Q86TH1 951 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PHYKPLQ8IUZ5 450 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 FUNDC1Q8IVP5 155 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 AHI1Q8N157 1196 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 TMEM102Q8N9M5 508 aaPredicted RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 DCAF4L2Q8NA75 395 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 SIDT2Q8NBJ9 832 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 OR2T34Q8NGX1 318 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 OR2T3Q8NH03 318 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 SH3RF2Q8TEC5 729 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 DDI1Q8WTU0 396 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 ATP6V1E2Q96A05 226 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 MYO19Q96H55 970 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 ZFRQ96KR1 1074 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 BIRC8Q96P09 236 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 ZNF382Q96SR6 550 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 UHRF1Q96T88 793 aaPredicted RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 GPATCH1Q9BRR8 931 aaKnown RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 LRRC3Q9BY71 257 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 PBX4Q9BYU1 374 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 TRIM54Q9BYV2 358 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 C8orf4Q9NR00 106 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 ARMC1Q9NVT9 282 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 ZIM2Q9NZV7 527 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 LHX3Q9UBR4 397 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 SUN2Q9UH99 717 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 POLG2Q9UHN1 485 aa9.34□□□□□ -0.91
SUB1-209ENST00000511615 LEF1Q9UJU2 399 aaPredicted RBP9.34□□□□□ -0.91
SUB1-209ENST00000511615 PCTPQ9UKL6 214 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms