RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CHUKO15111 745 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 MTX2O75431 263 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 RECKO95980 971 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 ZNF7P17097 686 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-212ENST00000498540 NELFEP18615 380 aaKnown RBP14.45□□□□□ -0.1
TRAF4-212ENST00000498540 RPL10P27635 214 aaKnown RBP14.45□□□□□ -0.1
TRAF4-212ENST00000498540 PRKCIP41743 596 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 CD86P42081 329 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 CHAF1BQ13112 559 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 DPYSL3Q14195 570 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 GALNT3Q14435 633 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 PAFAH1B3Q15102 231 aaKnown RBP14.45□□□□□ -0.1
TRAF4-212ENST00000498540 CCDC122Q5T0U0 273 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 PWWP2BQ6NUJ5 590 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 IRGCQ6NXR0 463 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 NIPA2Q8N8Q9 360 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 GPR26Q8NDV2 337 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 FAM71BQ8TC56 605 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 MLPHQ9BV36 600 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-212ENST00000498540 ISCUQ9H1K1 167 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 TRIM39Q9HCM9 518 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 SLC40A1Q9NP59 571 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 POT1Q9NUX5 634 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 AIPL1Q9NZN9 384 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 AMACRQ9UHK6 382 aa14.45□□□□□ -0.1
TRAF4-212ENST00000498540 PRRC2CQ9Y520 2896 aaKnown RBP14.44□□□□□ -0.1
TRAF4-212ENST00000498540 A1L4Q6 167 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 GPR89AB7ZAQ6 455 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 KMOO15229 486 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 SORBS2O94875 1100 aaKnown RBP14.44□□□□□ -0.1
TRAF4-212ENST00000498540 SLC4A1P02730 911 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 MT-ND3P03897 115 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 PIRTP0C851 137 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 GPR89BP0CG08 455 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 SKILP12757 684 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 CCNCP24863 283 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 ARSEP51690 589 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 PGDP52209 483 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 DRG2P55039 364 aaKnown RBP14.44□□□□□ -0.1
TRAF4-212ENST00000498540 KLHL30Q0D2K2 578 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 TUBB3Q13509 450 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 IL10RAQ13651 578 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 LAMB3Q13751 1172 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 KCNAB1Q14722 419 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 IFI16Q16666 785 aaKnown RBP14.44□□□□□ -0.1
TRAF4-212ENST00000498540 UGT8Q16880 541 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 KHDC1Q4VXA5 237 aaKnown RBP14.44□□□□□ -0.1
TRAF4-212ENST00000498540 PRR30Q53SZ7 412 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-212ENST00000498540 FAM182AQ5T1J6 154 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 FAM199XQ6PEV8 388 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-212ENST00000498540 LRRTM4Q86VH4 590 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 ZNF547Q8IVP9 402 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 FATE1Q969F0 183 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 GLYATL1Q969I3 302 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 TSGA13Q96PP4 275 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 TIMM29Q9BSF4 260 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 SLC25A23Q9BV35 468 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 ANO10Q9NW15 660 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 EPHA6Q9UF33 1036 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 ANAPC7Q9UJX3 599 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 MAP4K5Q9Y4K4 846 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 CENPEQ02224 2701 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 CACNA1DQ01668 2161 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 HIVEP3Q5T1R4 2406 aa14.44□□□□□ -0.1
TRAF4-212ENST00000498540 CREBBPQ92793 2442 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 IGHV5-51A0A0C4DH38 117 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 FOLR1P15328 257 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 PTPN4P29074 926 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 GJC1P36383 396 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 DCDC1P59894 354 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 GBE1Q04446 702 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 STX1AQ16623 288 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 ATP13A4Q4VNC1 1196 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 ABRAXAS1Q6UWZ7 409 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 CERS6Q6ZMG9 384 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 CPNE8Q86YQ8 564 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 TRAM1L1Q8N609 369 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 CXorf40BQ96DE9 158 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 ZDHHC12Q96GR4 267 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 SLC41A2Q96JW4 573 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 ZSCAN5AQ9BUG6 496 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 NUP85Q9BW27 656 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 THAP2Q9H0W7 228 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 ZFYVE1Q9HBF4 777 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 PDE7BQ9NP56 450 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 MLXIPLQ9NP71 852 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 LMBRD1Q9NUN5 540 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 HAUS2Q9NVX0 235 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 TRIM10Q9UDY6 481 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 RARRES3Q9UL19 164 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 SHOC2Q9UQ13 582 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 WDR37Q9Y2I8 494 aa14.43□□□□□ -0.1
TRAF4-212ENST00000498540 ARGFXA6NJG6 315 aa14.42□□□□□ -0.1
TRAF4-212ENST00000498540 EBLN1P0CF75 366 aa14.42□□□□□ -0.1
TRAF4-212ENST00000498540 SSR1P43307 286 aaKnown RBP14.42□□□□□ -0.1
TRAF4-212ENST00000498540 SLC10A2Q12908 348 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-212ENST00000498540 CCDC183Q5T5S1 534 aa14.42□□□□□ -0.1
TRAF4-212ENST00000498540 AGAP9Q5VTM2 703 aa14.42□□□□□ -0.1
TRAF4-212ENST00000498540 CYB5D1Q6P9G0 228 aa14.42□□□□□ -0.1
TRAF4-212ENST00000498540 SASS6Q6UVJ0 657 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms