RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SERPINB6P35237 376 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 MTIF2P46199 727 aaKnown RBP6.04□□□□□ -1.44
BRCA1-224ENST00000497488 RHAGQ02094 409 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 GAD2Q05329 585 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 DMWDQ09019 674 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 SCGB2A2Q13296 93 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 GPM6BQ13491 265 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 CEBPEQ15744 281 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 CYP2A13Q16696 494 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 CASC4Q6P4E1 433 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 SLC36A4Q6YBV0 504 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 LRRC55Q6ZSA7 311 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 DET1Q7L5Y6 550 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 TAF8Q7Z7C8 310 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 DTX1Q86Y01 620 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 C4orf19Q8IY42 314 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 PM20D2Q8IYS1 436 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 FBXO39Q8N4B4 442 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 C12orf76Q8N812 135 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-224ENST00000497488 CCNYQ8ND76 341 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 TAS1R2Q8TE23 839 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 SLAMF9Q96A28 289 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 MBD6Q96DN6 1003 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 KLHL5Q96PQ7 755 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 FRG2BQ96QU4 278 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 NUDCD1Q96RS6 583 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 SIN3AQ96ST3 1273 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 NAP1L3Q99457 506 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-224ENST00000497488 ABHD14AQ9BUJ0 271 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 C12orf65Q9H3J6 166 aaKnown RBP6.04□□□□□ -1.44
BRCA1-224ENST00000497488 SLC28A3Q9HAS3 691 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 MSL2Q9HCI7 577 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 FAM212BQ9NTI7 297 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-224ENST00000497488 AIPL1Q9NZN9 384 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 TRIM10Q9UDY6 481 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 FZD4Q9ULV1 537 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 PLEKHA6Q9Y2H5 1048 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 MYOM3Q5VTT5 1437 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 PLXNC1O60486 1568 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 CCDC141Q6ZP82 1450 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 C2orf92A0A1B0GVN3 265 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 DENND3A2RUS2 1198 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 CFAP73A6NFT4 308 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 ATP2A1O14983 1001 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 GMFGO60234 142 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 CREG1O75629 220 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 TJP3O95049 919 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 SERPING1P05155 500 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 PPP3CBP16298 524 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 CYP11B2P19099 503 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 EEF1B2P24534 225 aaKnown RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 ACP1P24666 158 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 DNAJB1P25685 340 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 RYKP34925 604 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 DHPSP49366 369 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 SERPINH1P50454 418 aaKnown RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 WDR5P61964 334 aaKnown RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 RESTQ13127 1097 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 LPIN1Q14693 890 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 ELAVL1Q15717 326 aaKnown RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 CNGA3Q16281 694 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 CCDC142Q17RM4 750 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 TCTN1Q2MV58 587 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 ERCC6LQ2NKX8 1250 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 IQCCQ4KMZ1 466 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 HERC4Q5GLZ8 1057 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 TPGS2Q68CL5 300 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 DENND2CQ68D51 928 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 SP5Q6BEB4 398 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 HIST2H2BCQ6DN03 193 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 HIST2H2BDQ6DRA6 164 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 PRSS42Q7Z5A4 293 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 HAPLN4Q86UW8 402 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 AMZ2Q86W34 360 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 RASAL3Q86YV0 1011 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 CADM3Q8N126 398 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 RASGEF1CQ8N431 466 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 ZCCHC9Q8N567 271 aaKnown RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 FAM133AQ8N9E0 248 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 IGSF8Q969P0 613 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 C14orf79Q96F83 325 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 ADAD1Q96M93 576 aaKnown RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 NSMCE2Q96MF7 247 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 PRRX2Q99811 253 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 IFT27Q9BW83 186 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 MOV10L1Q9BXT6 1211 aaKnown RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 S1PR5Q9H228 398 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 SRD5A3Q9H8P0 318 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 BPIFA1Q9NP55 256 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 TMEM161AQ9NX61 479 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 CCNL1Q9UK58 526 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-224ENST00000497488 U3KQV3 271 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 AGLP35573 1532 aa6.03□□□□□ -1.44
BRCA1-224ENST00000497488 ZNF541Q9H0D2 1346 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 ADGBQ8N7X0 1667 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 F8WDY8 70 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 EBAG9O00559 213 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 SOCS6O14544 535 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 CXCL11O14625 94 aa6.02□□□□□ -1.45
BRCA1-224ENST00000497488 SMAD9O15198 467 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms