RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 TMCO4Q5TGY1 634 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 AGAP9Q5VTM2 703 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 IRGCQ6NXR0 463 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TMEM207Q6UWW9 146 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 KBTBD2Q8IY47 623 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 RDH11Q8TC12 318 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 USP13Q92995 863 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 WBP2Q969T9 261 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 PPP1R2P1Q96PQ5 205 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 CENPKQ9BS16 269 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SLC2A11Q9BYW1 496 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 NDEL1Q9GZM8 345 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 GPR27Q9NS67 375 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 CDH22Q9UJ99 828 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 PRELID1Q9Y255 219 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TDRKHQ9Y2W6 561 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 PCDHGC4Q9Y5F7 938 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 N6AMT1Q9Y5N5 214 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 INSL5Q9Y5Q6 135 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 LRRC14BA6NHZ5 514 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 DRGXA6NNA5 263 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 A8MT66 165 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 STX16-NPEPL1H3BU86 382 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 RFXAPO00287 272 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 ACSL4O60488 711 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 PRAMEF11O60813 436 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 ATG13O75143 517 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 H2AFYO75367 372 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 KLKB1P03952 638 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 ATP5BP06576 529 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 LTA4HP09960 611 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 COL6A2P12110 1019 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 HDCP19113 662 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TCN1P20061 433 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 DRD1P21728 446 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 GALK1P51570 392 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 NEK2P51955 445 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 ARPC4P59998 168 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 GNA12Q03113 381 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SEMA3AQ14563 771 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 PARP15Q460N3 678 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 C6orf183Q5T699 404 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 CLEC6AQ6EIG7 209 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 FAAH2Q6GMR7 532 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 KLC3Q6P597 504 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TMEM150AQ86TG1 271 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SLC15A3Q8IY34 581 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SIX5Q8N196 739 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 ZNF557Q8N988 423 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 NAT14Q8WUY8 206 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 AUTS2Q8WXX7 1259 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 RCN3Q96D15 328 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 NMD3Q96D46 503 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 NSMCE3Q96MG7 304 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 C1orf21Q9H246 121 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 MRM3Q9HC36 420 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 ATP13A1Q9HD20 1204 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 DNMT3LQ9UJW3 386 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 A0A087X1B8 175 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 BOLA2-SMG1P6H3BVE0 249 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SLC7A4O43246 635 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 COCHO43405 550 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SEC24AO95486 1093 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 HOXD9P28356 352 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 LEPRP48357 1165 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 CCNG1P51959 295 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SH3BGRP55822 239 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 AP2B1P63010 937 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 FOXD4Q12950 439 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 PPP1R3AQ16821 1122 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 GEN1Q17RS7 908 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TECRLQ5HYJ1 363 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 Q6ZNB5 142 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TEX26Q8N6G2 289 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SMARCD2Q92925 531 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 MPP4Q96JB8 637 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 CINPQ9BW66 212 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 MRGBPQ9NV56 204 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 NDE1Q9NXR1 346 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 TUBA8Q9NY65 449 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 CROTQ9UKG9 612 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 POMPQ9Y244 141 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 NEUROG3Q9Y4Z2 214 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SPO11Q9Y5K1 396 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 HTR3EA5X5Y0 456 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 MAGEA13PA6NCF6 341 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 C2orf78A6NCI8 922 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 PPP6CO00743 305 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 TOR1BO14657 336 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 CD3EAPO15446 510 aaKnown RBP6.96□□□□□ -1.29
HERC4-211ENST00000492996 MAP3K7O43318 606 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 IPO13O94829 963 aaKnown RBP6.96□□□□□ -1.29
HERC4-211ENST00000492996 SIX3O95343 332 aaPredicted RBP6.96□□□□□ -1.29
HERC4-211ENST00000492996 IGLV3-27P01718 113 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 ZNF806P0C7X5 589 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 SPATA31D3P0C874 917 aa6.96□□□□□ -1.29
HERC4-211ENST00000492996 HMGA1P17096 107 aaKnown RBP6.96□□□□□ -1.29
HERC4-211ENST00000492996 CORO1AP31146 461 aaKnown RBP6.96□□□□□ -1.29
HERC4-211ENST00000492996 MLLT3P42568 568 aaPredicted RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms