RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 LRP3O75074 770 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 NKX2-2O95096 273 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 IPO7O95373 1038 aaKnown RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 TFP02787 698 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 PTPN2P17706 415 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ITGAXP20702 1163 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 MPGP29372 298 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ARHGAP25P42331 645 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 HDAC4P56524 1084 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 PRAMEP78395 509 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 GHRHRQ02643 423 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 GAD2Q05329 585 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF91Q05481 1191 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 LRMPQ12912 555 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 CSTF3Q12996 717 aaKnown RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 STK4Q13043 487 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 CAPSQ13938 189 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 BECN1Q14457 450 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 MTHFSDQ2M296 383 aaKnown RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ZSCAN23Q3MJ62 389 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 MIDNQ504T8 468 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 TTC39AQ5SRH9 613 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ISM2Q6H9L7 571 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 SNRNP48Q6IEG0 339 aaKnown RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 TMCO2Q7Z6W1 182 aaPredicted RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ARHGAP12Q8IWW6 846 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 SLC25A41Q8N5S1 370 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 HORMAD2Q8N7B1 307 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 JAKMIP2Q96AA8 810 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 C1orf74Q96LT6 269 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 NEK1Q96PY6 1258 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 MAP7D2Q96T17 732 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 STRA6Q9BX79 667 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 BPIFA1Q9NP55 256 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 PLSCR4Q9NRQ2 329 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 PLK2Q9NYY3 685 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 DLGAP2Q9P1A6 1054 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ANKMY1Q9P2S6 941 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 CNOT8Q9UFF9 292 aaKnown RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 AAR2Q9Y312 384 aaKnown RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 DMRT1Q9Y5R6 373 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 ROBO3Q96MS0 1386 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 MAPK8IP3Q9UPT6 1336 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 ICE1Q9Y2F5 2266 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 A0A1W2PQF6 199 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 SLC15A5A6NIM6 579 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 LINC01548A6NM66 108 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 HSPB2A8KAH6 182 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 KLRF2D3W0D1 207 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 F8W810 466 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 SEC14L5O43304 696 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 KIF1CO43896 1103 aaKnown RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 PLOD3O60568 738 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 MT-CYBP00156 380 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 DNTTP04053 509 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 TFPIP10646 304 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 PCNAP12004 261 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 UNGP13051 313 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 MYL6BP14649 208 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 CTPS1P17812 591 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 BMP5P22003 454 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 SP100P23497 879 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 PTGER1P34995 402 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 PSMB10P40306 273 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 EIF2DP41214 584 aaKnown RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 LIMK1P53667 647 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 INHBCP55103 352 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 PSMC6P62333 389 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 FKBP1AP62942 108 aaKnown RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 IRX3P78415 501 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 IFI35P80217 286 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 GRIK3Q13003 919 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 COASYQ13057 564 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 GPM6BQ13491 265 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 IRF3Q14653 427 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 HSPB2Q16082 182 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 CEP78Q5JTW2 689 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF66Q6ZN08 573 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 FAM83HQ6ZRV2 1179 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 SERPINA11Q86U17 422 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 GGNQ86UU5 652 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 CCDC13Q8IYE1 715 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 TEX11Q8IYF3 940 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 ADGRF2Q8IZF7 708 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 FAM185AQ8N0U4 392 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 GJC3Q8NFK1 279 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 SEMA6DQ8NFY4 1073 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 TMEM170AQ8WVE7 144 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 RNF183Q96D59 192 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 FEM1CQ96JP0 617 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 FAM118BQ9BPY3 351 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 PAPOLBQ9NRJ5 636 aaKnown RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 TMOD2Q9NZR1 351 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 CHORDC1Q9UHD1 332 aaPredicted RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 LSM4Q9Y4Z0 139 aaKnown RBP4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 NEUROG3Q9Y4Z2 214 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 MED13LQ71F56 2210 aa4.97□□□□□ -1.61
SSX2IP-208ENST00000490476 SDK1Q7Z5N4 2213 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms