RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 IGHV1OR21-1A0A087WYE8 117 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 C2orf81A6NN90 581 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 KMOO15229 486 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 PRAMEF1O95521 474 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 FGGP02679 453 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 BRAFP15056 766 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 ZNF7P17097 686 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-214ENST00000490398 MPSTP25325 297 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 ITPKBP27987 946 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 CSF2RBP32927 897 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 CDKN1CP49918 316 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-214ENST00000490398 INHBCP55103 352 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 ZFP36L1Q07352 338 aaKnown RBP17.86■□□□□ 0.45
COL9A3-214ENST00000490398 NFATC2Q13469 925 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 POU6F1Q14863 301 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 SEPT7Q16181 437 aaKnown RBP17.86■□□□□ 0.45
COL9A3-214ENST00000490398 INSCQ1MX18 579 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 BEND7Q8N7W2 519 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-214ENST00000490398 DDHD1Q8NEL9 900 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 TRIM58Q8NG06 486 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 OR52K1Q8NGK4 314 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 OSGEPL1Q9H4B0 414 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 LRRC40Q9H9A6 602 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 KIF26BQ2KJY2 2108 aa17.86■□□□□ 0.45
COL9A3-214ENST00000490398 CCDC187A0A096LP49 1063 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 CCDC78A2IDD5 438 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 SGTAO43765 313 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 CEP104O60308 925 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 PPFIA2O75334 1257 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 SRP72O76094 671 aaKnown RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 F3P13726 295 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 RPL22P35268 128 aaKnown RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 EIF2S3P41091 472 aaKnown RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 FASLGP48023 281 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 KCNJ1P48048 391 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 CLCNKAP51800 687 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 DRG2P55039 364 aaKnown RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 C16orf72Q14CZ0 275 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 ZDHHC20Q5W0Z9 365 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 TMEM220Q6QAJ8 160 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 XKR5Q6UX68 686 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 FAM83HQ6ZRV2 1179 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 DET1Q7L5Y6 550 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 TRAPPC5Q8IUR0 188 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 WDR36Q8NI36 951 aaKnown RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 FGF11Q92914 225 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 LIN37Q96GY3 246 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 FRMD8P1Q9BZ68 369 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 ASB8Q9H765 288 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 SMOXQ9NWM0 555 aa17.85■□□□□ 0.45
COL9A3-214ENST00000490398 ZNF624Q9P2J8 865 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-214ENST00000490398 URB1O60287 2271 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 A0A087WV48 116 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 OR2AG2A6NM03 316 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 GPR89AB7ZAQ6 455 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 POP7O75817 140 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 ZNF189O75820 626 aaPredicted RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 DXOO77932 396 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 CRTAMO95727 393 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 GPR89BP0CG08 455 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 ITIH1P19827 911 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 RPL10P27635 214 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 STIP1P31948 543 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 CCKBRP32239 447 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 ETV5P41161 510 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 UBE2IP63279 158 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 BIRC2Q13490 618 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 CCNG2Q16589 344 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 COL28A1Q2UY09 1125 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 MAP9Q49MG5 647 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 CCDC38Q502W7 563 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 LDLRAP1Q5SW96 308 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 RCBTB1Q8NDN9 531 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 SNIP1Q8TAD8 396 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 UBE2Q2Q8WVN8 375 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 SGF29Q96ES7 293 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 NAF1Q96HR8 494 aaKnown RBP17.84■□□□□ 0.45
COL9A3-214ENST00000490398 MS4A14Q96JA4 679 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 SLC46A1Q96NT5 459 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 PPP1R2P1Q96PQ5 205 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 TIMM29Q9BSF4 260 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 TBC1D10AQ9BXI6 508 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 KCNK4Q9NYG8 393 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 SMARCAL1Q9NZC9 954 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 WDR37Q9Y2I8 494 aa17.84■□□□□ 0.45
COL9A3-214ENST00000490398 IGHV5-10-1A0A0J9YXX1 117 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 AGAP14A8MT82 685 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 TNFSF15O95150 251 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 CPNE6O95741 557 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 ACTN2P35609 894 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 SLC19A1P41440 591 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 GPR3P46089 330 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 ARSDP51689 593 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 HHEXQ03014 270 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 CCDC173Q0VFZ6 552 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 ITGA9Q13797 1035 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 GTF2H3Q13889 308 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 SEPT6Q14141 434 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 CLCA4Q14CN2 919 aa17.83■□□□□ 0.44
COL9A3-214ENST00000490398 PHF19Q5T6S3 580 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms