RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 DAB1O75553 588 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 ICAM1P05362 532 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 IGHV4-38-2P0DP08 117 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 MSH3P20585 1137 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 NR2F2P24468 414 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 DRG2P55039 364 aaKnown RBP3.48□□□□□ -1.85
HMGN1-218ENST00000490032 MBTD1Q05BQ5 628 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 SPOCK1Q08629 439 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 ADIPOQQ15848 244 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 TMEM95Q3KNT9 176 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 SEPT14Q6ZU15 432 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 LONP2Q86WA8 852 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 HEATR4Q86WZ0 1026 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 CNTROBQ8N137 903 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 GCSAMQ8N6F7 178 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 DBF4BQ8NFT6 615 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 METTL6Q8TCB7 284 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 HM13Q8TCT9 377 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 ZUFSPQ96AP4 578 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 RRP36Q96EU6 259 aaKnown RBP3.48□□□□□ -1.85
HMGN1-218ENST00000490032 EGLN2Q96KS0 407 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 SEPT5Q99719 369 aaPredicted RBP3.48□□□□□ -1.85
HMGN1-218ENST00000490032 SLX1AQ9BQ83 275 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 TMEM39BQ9GZU3 492 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 PIGMQ9H3S5 423 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 PDZD7Q9H5P4 517 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 BICC1Q9H694 974 aaKnown RBP3.48□□□□□ -1.85
HMGN1-218ENST00000490032 TRPC7Q9HCX4 862 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 RANGRFQ9HD47 186 aaPredicted RBP3.48□□□□□ -1.85
HMGN1-218ENST00000490032 CWC15Q9P013 229 aaKnown RBP3.48□□□□□ -1.85
HMGN1-218ENST00000490032 FBXW11Q9UKB1 542 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 JRKLQ9Y4A0 524 aa3.48□□□□□ -1.85
HMGN1-218ENST00000490032 A0A087X002 238 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 IGKV3D-20A0A0C4DH25 116 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 PSMD14O00487 310 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 SLC25A12O75746 678 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 MLYCDO95822 493 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 NR3C1P04150 777 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 TFAP2AP05549 437 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 ZNF26P17031 533 aaPredicted RBP3.47□□□□□ -1.85
HMGN1-218ENST00000490032 LUMP51884 338 aaPredicted RBP3.47□□□□□ -1.85
HMGN1-218ENST00000490032 CTSCP53634 463 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 CDC16Q13042 620 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 ITGA9Q13797 1035 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 SDCCAG8Q86SQ7 713 aaPredicted RBP3.47□□□□□ -1.85
HMGN1-218ENST00000490032 RNF168Q8IYW5 571 aaPredicted RBP3.47□□□□□ -1.85
HMGN1-218ENST00000490032 GBGT1Q8N5D6 347 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 EMC1Q8N766 993 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 HCAR2Q8TDS4 363 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 ZNF473Q8WTR7 871 aaKnown RBP3.47□□□□□ -1.85
HMGN1-218ENST00000490032 SGCDQ92629 289 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 SMARCE1Q969G3 411 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 OXNAD1Q96HP4 312 aaPredicted RBP3.47□□□□□ -1.85
HMGN1-218ENST00000490032 MTMR10Q9NXD2 777 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 OGFRQ9NZT2 677 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 CRYL1Q9Y2S2 319 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 PRSS21Q9Y6M0 314 aa3.47□□□□□ -1.85
HMGN1-218ENST00000490032 ARHGEF40Q8TER5 1519 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 A6NLC8 198 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 MAP2K7O14733 419 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 HCRTR2O43614 444 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 KCNK5O95279 499 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 IPO7O95373 1038 aaKnown RBP3.46□□□□□ -1.86
HMGN1-218ENST00000490032 TAS2R40P59535 323 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 CEBPZQ03701 1054 aaKnown RBP3.46□□□□□ -1.86
HMGN1-218ENST00000490032 ZRSR2Q15696 482 aaKnown RBP3.46□□□□□ -1.86
HMGN1-218ENST00000490032 DUOXA1Q1HG43 343 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 TSPAN33Q86UF1 283 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 SMAP1Q8IYB5 467 aaPredicted RBP3.46□□□□□ -1.86
HMGN1-218ENST00000490032 RASGEF1CQ8N431 466 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 SLC5A8Q8N695 610 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 TMEM116Q8NCL8 245 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 SMC6Q96SB8 1091 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 SEMA3CQ99985 751 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 ERVMER34-1Q9H9K5 563 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 APOBEC3GQ9HC16 384 aaKnown RBP3.46□□□□□ -1.86
HMGN1-218ENST00000490032 PREBQ9HCU5 417 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 DISP3Q9P2K9 1392 aa3.46□□□□□ -1.86
HMGN1-218ENST00000490032 C15orf62A8K5M9 175 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 SLC22A2O15244 555 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 SELLP14151 372 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 HOXA13P31271 388 aaPredicted RBP3.45□□□□□ -1.86
HMGN1-218ENST00000490032 BSGP35613 385 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 KRTAP10-3P60369 221 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 IRX1P78414 480 aaPredicted RBP3.45□□□□□ -1.86
HMGN1-218ENST00000490032 KIAA1644Q3SXP7 199 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 ASPRV1Q53RT3 343 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 LRIF1Q5T3J3 769 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 MFSD6Q6ZSS7 791 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 R3HCC1LQ7Z5L2 792 aaKnown RBP3.45□□□□□ -1.86
HMGN1-218ENST00000490032 SPEM1Q8N4L4 309 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 PAF1Q8N7H5 531 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 TRPC4APQ8TEL6 797 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 PPP4R1Q8TF05 950 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 PERPQ96FX8 193 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 JMJD4Q9H9V9 463 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 EPB41L5Q9HCM4 733 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 UBN1Q9NPG3 1134 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms