RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 UNKQ9C0B0 810 aaKnown RBP21.41■■□□□ 1.02
SMC4-221ENST00000489573 LTB4R2Q9NPC1 389 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 COPG2Q9UBF2 871 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 NCKAP1Q9Y2A7 1128 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 IGLON5A6NGN9 336 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 SOD1P00441 154 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 RALBP11234 206 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 TAC1P20366 129 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 MSH3P20585 1137 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 GPR1P46091 355 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 CLCN7P51798 805 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 ADPRHP54922 357 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 STARD6P59095 220 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 PCLAFQ15004 111 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 ACAP2Q15057 778 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 RAET1GQ6H3X3 334 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 PHYKPLQ8IUZ5 450 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 NUDCD3Q8IVD9 361 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 TRIM42Q8IWZ5 723 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 GIMAP7Q8NHV1 300 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 SLC30A3Q99726 388 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 MRPL57Q9BQC6 102 aaKnown RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 MRPL46Q9H2W6 279 aaKnown RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 LMAN1LQ9HAT1 526 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 SARS2Q9NP81 518 aaKnown RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 SIRPGQ9P1W8 387 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 XPR1Q9UBH6 696 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 DHRS7Q9Y394 339 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 BPTFQ12830 3046 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 LRRK1Q38SD2 2015 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 CHURC1-FNTBB4DL54 471 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 TK2O00142 265 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 VIMP08670 466 aaKnown RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 OR56A5P0C7T3 313 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 ATP1B2P14415 290 aaPredicted RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 CPA3P15088 417 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 UBXN2BQ14CS0 331 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 SEL1L3Q68CR1 1132 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 KIAA1161Q6NSJ0 714 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 NKAPQ8N5F7 415 aaKnown RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 LKAAEAR1Q8TD35 194 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 NAT14Q8WUY8 206 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 ZNF75CPQ92670 426 aaPredicted RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 PANX3Q96QZ0 392 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 MANSC1Q9H8J5 431 aa21.4■■□□□ 1.02
SMC4-221ENST00000489573 POLMQ9NP87 494 aaPredicted RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 CPSF2Q9P2I0 782 aaKnown RBP21.4■■□□□ 1.02
SMC4-221ENST00000489573 KANSL1LA0AUZ9 987 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 MTX2O75431 263 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 AP2A2O94973 939 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 SLC25A14O95258 325 aaPredicted RBP21.39■■□□□ 1.01
SMC4-221ENST00000489573 TRIM16O95361 564 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 RBP1P09455 135 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 CD1DP15813 335 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 GABRG2P18507 467 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 BGNP21810 368 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 ALDH3A1P30838 453 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 RPS21P63220 83 aaKnown RBP21.39■■□□□ 1.01
SMC4-221ENST00000489573 AGERQ15109 404 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 TECRLQ5HYJ1 363 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 LRRC34Q8IZ02 419 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 PELI3Q8N2H9 469 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 TMEM151AQ8N4L1 468 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 PREBQ9HCU5 417 aa21.39■■□□□ 1.01
SMC4-221ENST00000489573 G3V2L1 256 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 K7ESM1 405 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 INPP4BO15327 924 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 SBK3P0C264 359 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 MYL2P10916 166 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 ITGB6P18564 788 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 TFEBP19484 476 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 DGKEP52429 567 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 KHDC1Q4VXA5 237 aaKnown RBP21.38■■□□□ 1.01
SMC4-221ENST00000489573 ZYG11AQ6WRX3 759 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 DET1Q7L5Y6 550 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 SYT13Q7L8C5 426 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 UBALD2Q8IYN6 164 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 SIX5Q8N196 739 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 FLCNQ8NFG4 579 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 RAB3IL1Q8TBN0 382 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 INPP5DQ92835 1189 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 DERL2Q9GZP9 239 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 RABEP2Q9H5N1 569 aa21.38■■□□□ 1.01
SMC4-221ENST00000489573 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.38■■□□□ 1.01
SMC4-221ENST00000489573 CNOT6Q9ULM6 557 aaKnown RBP21.38■■□□□ 1.01
SMC4-221ENST00000489573 ZFR2Q9UPR6 939 aaKnown RBP21.38■■□□□ 1.01
SMC4-221ENST00000489573 TARM1B6A8C7 271 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 F8W8V4 182 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 RNGTTO60942 597 aaKnown RBP21.37■■□□□ 1.01
SMC4-221ENST00000489573 ATG13O75143 517 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 KCNA4P22459 653 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 IL2P60568 153 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 ATP6V0D1P61421 351 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 CHI3L2Q15782 390 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 C10orf107Q8IVU9 208 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 CPNE9Q8IYJ1 553 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 HMGB4Q8WW32 186 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 LINGO1Q96FE5 620 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 NELL2Q99435 816 aa21.37■■□□□ 1.01
SMC4-221ENST00000489573 TSSK1BQ9BXA7 367 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms