RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 GABRB2P47870 512 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 TUBB4BP68371 445 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 CSNK1G2P78368 415 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 CETN1Q12798 172 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 ABRQ12979 859 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 TUBB2AQ13885 445 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 GPR18Q14330 331 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 CDO1Q16878 200 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 C15orf59Q2T9L4 293 aaPredicted RBP9.46□□□□□ -0.9
PTPN7-213ENST00000486116 C2CD6Q53TS8 623 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 GFRALQ6UXV0 394 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 TRIM48Q8IWZ4 208 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 SYTL1Q8IYJ3 562 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 UMODL1-AS1Q8N2C9 162 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 PYROXD2Q8N2H3 581 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 D2HGDHQ8N465 521 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 EMC1Q8N766 993 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 AP2M1Q96CW1 435 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 CNDP1Q96KN2 507 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 PCMTD1Q96MG8 357 aaPredicted RBP9.46□□□□□ -0.9
PTPN7-213ENST00000486116 MAP3K3Q99759 626 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 SMR3AQ99954 134 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 TUBB2BQ9BVA1 445 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 TNFRSF10DQ9UBN6 386 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 SIK3Q9Y2K2 1263 aa9.46□□□□□ -0.9
PTPN7-213ENST00000486116 GOLGA8SH3BPF8 625 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 FANCGO15287 622 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 HTRA2O43464 458 aaPredicted RBP9.45□□□□□ -0.9
PTPN7-213ENST00000486116 CYP2A6P11509 494 aaPredicted RBP9.45□□□□□ -0.9
PTPN7-213ENST00000486116 FOSL1P15407 271 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 EPHB2P29323 1055 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 SCNN1BP51168 640 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 PTCHD3Q3KNS1 767 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 MEX3BQ6ZN04 569 aaKnown RBP9.45□□□□□ -0.9
PTPN7-213ENST00000486116 PHYKPLQ8IUZ5 450 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 TMEM151BQ8IW70 566 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 EXD1Q8NHP7 514 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 COG1Q8WTW3 980 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 CPT1BQ92523 772 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 NR4A3Q92570 626 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 C18orf8Q96DM3 657 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 CLIP3Q96DZ5 547 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 IP6K3Q96PC2 410 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 GBP5Q96PP8 586 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 SMIM14Q96QK8 99 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 TAAR6Q96RI8 345 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 TSG101Q99816 390 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 TRIM56Q9BRZ2 755 aaKnown RBP9.45□□□□□ -0.9
PTPN7-213ENST00000486116 CINPQ9BW66 212 aaPredicted RBP9.45□□□□□ -0.9
PTPN7-213ENST00000486116 LRRC19Q9H756 370 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 SLC40A1Q9NP59 571 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 P4HTMQ9NXG6 502 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 CNOT6Q9ULM6 557 aaKnown RBP9.45□□□□□ -0.9
PTPN7-213ENST00000486116 HPSEQ9Y251 543 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 PCDHGC4Q9Y5F7 938 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 MXRA5Q9NR99 2828 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 CPAMD8Q8IZJ3 1885 aa9.45□□□□□ -0.9
PTPN7-213ENST00000486116 ATMINO43313 823 aaPredicted RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 LDB2O43679 373 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 PALMO75781 387 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 UNC5CO95185 931 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 LCA5LO95447 670 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 BRAFP15056 766 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 ARCN1P48444 511 aaKnown RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 CLCNKAP51800 687 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 AP1S1P61966 158 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 HSD11B2P80365 405 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 APBA1Q02410 837 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 NSUN2Q08J23 767 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 PRKD1Q15139 912 aaPredicted RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 TLR1Q15399 786 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 CCDC14Q49A88 953 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 ZNF789Q5FWF6 425 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 TMEM198Q66K66 360 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 RPUSD3Q6P087 351 aaKnown RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 TMEM207Q6UWW9 146 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 PPP1R32Q7Z5V6 425 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 KMT5CQ86Y97 462 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 AOPEPQ8N6M6 819 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 OR8K5Q8NH50 307 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 SCRN2Q96FV2 425 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 MCCC1Q96RQ3 725 aaPredicted RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 RIOK2Q9BVS4 552 aaKnown RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 OSGEPL1Q9H4B0 414 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 KLC4Q9NSK0 619 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 POT1Q9NUX5 634 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
PTPN7-213ENST00000486116 INTS1Q8N201 2190 aaKnown RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 HRNRQ86YZ3 2850 aaPredicted RBP9.44□□□□□ -0.9
PTPN7-213ENST00000486116 OR52A4PA6NMU1 304 aa9.43□□□□□ -0.9
PTPN7-213ENST00000486116 PEX12O00623 359 aa9.43□□□□□ -0.9
PTPN7-213ENST00000486116 DDX3YO15523 660 aaKnown RBP9.43□□□□□ -0.9
PTPN7-213ENST00000486116 ALOX12BO75342 701 aa9.43□□□□□ -0.9
PTPN7-213ENST00000486116 IGHEP01854 428 aa9.43□□□□□ -0.9
PTPN7-213ENST00000486116 PYGLP06737 847 aa9.43□□□□□ -0.9
PTPN7-213ENST00000486116 CTPS1P17812 591 aa9.43□□□□□ -0.9
PTPN7-213ENST00000486116 CDH5P33151 784 aaPredicted RBP9.43□□□□□ -0.9
PTPN7-213ENST00000486116 KRT9P35527 623 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms