RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	CEP57	Q86XR8	500 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	GALNT13	Q8IUC8	556 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	PCDH20	Q8N6Y1	951 aa	Known RBP	4.03	□□□□□ -1.76
FN1-222	ENST00000485567	EMC1	Q8N766	993 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567		Q8NFD4	153 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	OR6J1	Q8NGC5	347 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	THAP6	Q8TBB0	222 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	TAS1R2	Q8TE23	839 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	OIT3	Q8WWZ8	545 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	RND1	Q92730	232 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	HDAC11	Q96DB2	347 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	ZNF830	Q96NB3	372 aa	Predicted RBP	4.03	□□□□□ -1.76
FN1-222	ENST00000485567	SLC22A12	Q96S37	553 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	DDO	Q99489	341 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	SEMA3C	Q99985	751 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	SYT17	Q9BSW7	474 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	SEZ6L	Q9BYH1	1024 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	DCLK3	Q9C098	648 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	ANKRD2	Q9GZV1	360 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	OPA3	Q9H6K4	179 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	PFDN4	Q9NQP4	134 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	MCM9	Q9NXL9	1143 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	HAO2	Q9NYQ3	351 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	GAGE2D	Q9UEU5	116 aa		4.03	□□□□□ -1.76
FN1-222	ENST00000485567	EDDM13	A0A1B0GTR0	161 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567		A0A1B0GVT2	93 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	TNFRSF13B	O14836	293 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	ANKRD28	O15084	1053 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	RECQL5	O94762	991 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	ZWINT	O95229	277 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	IGHD	P01880	384 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	HSP90AB1	P08238	724 aa	Known RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	LINGO3	P0C6S8	592 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	PSG1	P11464	419 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	PFKFB1	P16118	471 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	ERCC2	P18074	760 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	PTAFR	P25105	342 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	ABCG1	P45844	678 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	KCNJ4	P48050	445 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	CLK1	P49759	484 aa	Known RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	CLCNKA	P51800	687 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	C21orf58	P58505	322 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	PPP2R2B	Q00005	443 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	TRAF2	Q12933	501 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	KLF9	Q13886	244 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	CTF1	Q16619	201 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	LETM2	Q2VYF4	491 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	ARMC4	Q5T2S8	1044 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	C11orf87	Q6NUJ2	197 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	THNSL1	Q8IYQ7	743 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	NRAC	Q8N912	160 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	NEXN-AS1	Q8NBZ9	246 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	RBM15B	Q8NDT2	890 aa	Known RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	CFAP61	Q8NHU2	1237 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	SPACA9	Q96E40	222 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	TXNDC15	Q96J42	360 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	MYCBP	Q99417	103 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	NAA11	Q9BSU3	229 aa	Predicted RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	SLC25A23	Q9BV35	468 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	RBM38	Q9H0Z9	239 aa	Known RBP	4.02	□□□□□ -1.77
FN1-222	ENST00000485567	SLITRK6	Q9H5Y7	841 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	ANKZF1	Q9H8Y5	726 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	TAS2R14	Q9NYV8	317 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	LOXL2	Q9Y4K0	774 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	PTGDR2	Q9Y5Y4	395 aa		4.02	□□□□□ -1.77
FN1-222	ENST00000485567	WDR91	A4D1P6	747 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567		J3QR06	171 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	SOCS6	O14544	535 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	SERPINI2	O75830	405 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	KCNK5	O95279	499 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	TRUB2	O95900	331 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	LMO1	P25800	156 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	NMBR	P28336	390 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	C21orf33	P30042	268 aa	Predicted RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	HOXC8	P31273	242 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	NR4A2	P43354	598 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	PGGT1B	P53609	377 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	CTSC	P53634	463 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	CLDN20	P56880	219 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	NANOS3	P60323	173 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	WASHC5	Q12768	1159 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	BFSP1	Q12934	665 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	NR1D2	Q14995	579 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	LEXM	Q3ZCV2	418 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ATP13A5	Q4VNC0	1218 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	KRTCAP3	Q53RY4	240 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	LCE1D	Q5T752	114 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	FAM122C	Q6P4D5	195 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	FAM198B	Q6UWH4	519 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ZNF534	Q76KX8	674 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ERN2	Q76MJ5	926 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	IQCH	Q86VS3	1027 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	SNX32	Q86XE0	403 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	PM20D2	Q8IYS1	436 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	PI4KAP1	Q8N8J0	262 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	PAPD5	Q8NDF8	572 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	OR14A16	Q8NHC5	309 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms