RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 CDKN2AIPNLQ96HQ2 116 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 C19orf43Q9BQ61 176 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 LRIT1Q9P2V4 623 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 TBC1D29Q9UFV1 150 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 SLC2A6Q9UGQ3 507 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 CLCA2Q9UQC9 943 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 NEU2Q9Y3R4 380 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TPRP12270 2363 aaKnown RBP13.2□□□□□ -0.3
SSR1-208ENST00000483409 OR51F1A6NGY5 319 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 H7C0S8 307 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 MT-CO3P00414 261 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TPSB2P20231 275 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 ADRA1DP25100 572 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
SSR1-208ENST00000483409 CRADDP78560 199 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSR1-208ENST00000483409 BIRC2Q13490 618 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 KCNJ11Q14654 390 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TPSAB1Q15661 275 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 SEPT7Q16181 437 aaKnown RBP13.2□□□□□ -0.3
SSR1-208ENST00000483409 SKIDA1Q1XH10 827 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 FNBP1LQ5T0N5 605 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TSTD2Q5T7W7 516 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 ANKRD22Q5VYY1 191 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TMEM220Q6QAJ8 160 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 ZNF534Q76KX8 674 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 C17orf82Q86X59 251 aaPredicted RBP13.2□□□□□ -0.3
SSR1-208ENST00000483409 CREG2Q8IUH2 290 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 NXPE1Q8N323 547 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 ARL14Q8N4G2 192 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
SSR1-208ENST00000483409 OR6C4Q8NGE1 309 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 SLC37A2Q8TED4 501 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 GRK7Q8WTQ7 553 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 GATA6Q92908 595 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 ZNF778Q96MU6 729 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 RANBP9Q96S59 729 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TIMM29Q9BSF4 260 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 PRDM8Q9NQV8 689 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 TCAF1Q9Y4C2 921 aa13.2□□□□□ -0.3
SSR1-208ENST00000483409 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 RHPN2P1A8MT19 583 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 AGAP14A8MT82 685 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 NUDT21O43809 227 aaKnown RBP13.19□□□□□ -0.3
SSR1-208ENST00000483409 TMEM63AO94886 807 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 RPLP0P05388 317 aaKnown RBP13.19□□□□□ -0.3
SSR1-208ENST00000483409 C1QTNF9P0C862 333 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 MGAT1P26572 445 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CCL7P80098 99 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CDK16Q00536 496 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 B4GALNT1Q00973 533 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CACNG1Q06432 222 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 LAMB3Q13751 1172 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 PPP1R7Q15435 360 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CDCP2Q5VXM1 449 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 TAS2R42Q7RTR8 314 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 C11orf96Q7Z7L8 435 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 SERPINA9Q86WD7 417 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CCNJLQ8IV13 435 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 PIANPQ8IYJ0 282 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 BEND7Q8N7W2 519 aaPredicted RBP13.19□□□□□ -0.3
SSR1-208ENST00000483409 DCBLD1Q8N8Z6 715 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 OR13J1Q8NGT2 312 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CPT1BQ92523 772 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 HDAC10Q969S8 669 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 SGF29Q96ES7 293 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 DCUN1D1Q96GG9 259 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CNTNAP3BQ96NU0 1288 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 DEPDC7Q96QD5 511 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CNTNAP3Q9BZ76 1288 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 IL22Q9GZX6 179 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
SSR1-208ENST00000483409 TRBV5-4A0A0C4DH59 114 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 A6NCN8 305 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 PDZK1P1A8MUH7 402 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 GOLGA8MH3BSY2 632 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 PPM1DO15297 605 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 CSO75390 466 aaKnown RBP13.18□□□□□ -0.3
SSR1-208ENST00000483409 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
SSR1-208ENST00000483409 RALBP11234 206 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 F3P13726 295 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 VCLP18206 1134 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 PSMA3P25788 255 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 ACRV1P26436 265 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 ALDH4A1P30038 563 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 CASQ1P31415 396 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 FOXN2P32314 431 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 MAGEA6P43360 314 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 CLCNKAP51800 687 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 OR1D5P58170 312 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 SPIDRQ14159 915 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 GPR33Q49SQ1 333 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 PCID2Q5JVF3 399 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 LRRC8BQ6P9F7 803 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 AFTPHQ6ULP2 937 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 UNQ6494/PRO21346Q6UXR6 183 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms