RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 PSMD14O00487 310 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 ASAP2O43150 1006 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 ITM2AO43736 263 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 NKX2-2O95096 273 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 OR2C1O95371 312 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 LCATP04180 440 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 FAM90A13PP0C7W8 464 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 FAM90A24PP0C7X0 464 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 CSH1P0DML2 217 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 CSH2P0DML3 217 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 CDK4P11802 303 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 HOXB2P14652 356 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 TMEM11P17152 192 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 CDH8P55286 799 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 SORDQ00796 357 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 EPS8Q12929 822 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 CHAF1BQ13112 559 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 MYBPC2Q14324 1141 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 FSCBQ5H9T9 825 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 GKAP1Q5VSY0 366 aaPredicted RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 JADE1Q6IE81 842 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 SZRD1Q7Z422 152 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 RNF168Q8IYW5 571 aaPredicted RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 C1orf131Q8NDD1 294 aaKnown RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 SEPT5Q99719 369 aaPredicted RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 C1QTNF5Q9BXJ0 243 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 MAK16Q9BXY0 300 aaKnown RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 SLC29A3Q9BZD2 475 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 FTOQ9C0B1 505 aaKnown RBP eCLIP5.04□□□□□ -1.6
RFC4-212ENST00000479307 FAM234AQ9H0X4 552 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 RBM38Q9H0Z9 239 aaKnown RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 RANGRFQ9HD47 186 aaPredicted RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 MKKSQ9NPJ1 570 aaPredicted RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 OR6C3Q9NZP0 311 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 ADD3Q9UEY8 706 aaKnown RBP5.04□□□□□ -1.6
RFC4-212ENST00000479307 FZD10Q9ULW2 581 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 NIP7Q9Y221 180 aaKnown RBP eCLIP5.04□□□□□ -1.6
RFC4-212ENST00000479307 C5orf42Q9H799 3197 aa5.04□□□□□ -1.6
RFC4-212ENST00000479307 CFAP54Q96N23 3096 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 COL4A1P02462 1669 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 CDRT15L2A8MXV6 281 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 DAB1O75553 588 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 TOMM40O96008 361 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 PORP16435 677 aaPredicted RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 MCM3P25205 808 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 HOXA13P31271 388 aaPredicted RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 GARSP41250 739 aaKnown RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 PIK3CAP42336 1068 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 ZNF81P51508 661 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 NUDT6P53370 316 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 PCGF3Q3KNV8 242 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 ODF3L2Q3SX64 289 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 PPP6R3Q5H9R7 873 aaPredicted RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 FNBP1LQ5T0N5 605 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 ZNF425Q6IV72 752 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 METTL2BQ6P1Q9 378 aaKnown RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 SEPT14Q6ZU15 432 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 MTSS1LQ765P7 747 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 CHST9Q7L1S5 443 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 SHFQ7M4L6 423 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 TEX11Q8IYF3 940 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 SRBD1Q8N5C6 995 aaKnown RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 AADATQ8N5Z0 425 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 MIGA1Q8NAN2 632 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 ARRDC2Q8TBH0 407 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 SNRNP27Q8WVK2 155 aaKnown RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 ERGIC1Q969X5 290 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 METTL2AQ96IZ6 378 aaKnown RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 C1QTNF1Q9BXJ1 281 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 TEX13AQ9BXU3 409 aaPredicted RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 POLKQ9UBT6 870 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 CNOT8Q9UFF9 292 aaKnown RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 ZNF215Q9UL58 517 aaPredicted RBP5.03□□□□□ -1.6
RFC4-212ENST00000479307 TMEM5Q9Y2B1 443 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 DNAH12Q6ZR08 3092 aa5.03□□□□□ -1.6
RFC4-212ENST00000479307 ZNF521Q96K83 1311 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 REV3LO60673 3130 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 IGHV4-28A0A0C4DH34 117 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 DYTNA2CJ06 578 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 OR6C75A6NL08 312 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 BECN2A8MW95 431 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 TNFRSF13BO14836 293 aaPredicted RBP5.02□□□□□ -1.61
RFC4-212ENST00000479307 RGS14O43566 566 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 VNN2O95498 520 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 IL7RP16871 459 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 MAOAP21397 527 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 METAP2P50579 478 aaKnown RBP eCLIP5.02□□□□□ -1.61
RFC4-212ENST00000479307 PGGT1BP53609 377 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 PRMT2P55345 433 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 LRMPQ12912 555 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 TRAF1Q13077 416 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 CTTNQ14247 550 aaKnown RBP5.02□□□□□ -1.61
RFC4-212ENST00000479307 CCDC89Q8N998 374 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 RRNAD1Q96FB5 475 aaKnown RBP5.02□□□□□ -1.61
RFC4-212ENST00000479307 FEM1CQ96JP0 617 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 PKNOX2Q96KN3 472 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 ZNF778Q96MU6 729 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 LRFN5Q96NI6 719 aa5.02□□□□□ -1.61
RFC4-212ENST00000479307 TESK2Q96S53 571 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms