RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 TAP1Q03518 808 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 BFSP1Q12934 665 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SEMA3BQ13214 749 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PMS2P3Q13401 168 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TUBB3Q13509 450 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ALCAMQ13740 583 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 FHL2Q14192 279 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 GRM4Q14833 912 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ACOX1Q15067 660 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PDK2Q15119 407 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TAF5Q15542 800 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CHI3L2Q15782 390 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 DPY19L1Q2PZI1 675 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 INAVAQ3KP66 663 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 YIF1BQ5BJH7 314 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PIK3R6Q5UE93 754 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PLA2G4FQ68DD2 849 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 IGFL4Q6B9Z1 124 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ACAD10Q6JQN1 1059 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 RINT1Q6NUQ1 792 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PRMT9Q6P2P2 845 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 MOXD1Q6UVY6 613 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 HACD2Q6Y1H2 254 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TRIM72Q6ZMU5 477 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TMEM26Q6ZUK4 368 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 KCTD8Q6ZWB6 473 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 MRPL10Q7Z7H8 261 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SLC22A16Q86VW1 577 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 WDR49Q8IV35 697 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ZC3H7AQ8IWR0 971 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 AQP12AQ8IXF9 295 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SLC38A6Q8IZM9 456 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF444Q8N0Y2 327 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CCDC185Q8N715 623 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 OR6Q1Q8NGQ2 317 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 OR6F1Q8NGZ6 308 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 OLIG1Q8TAK6 271 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 C1orf54Q8WWF1 131 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PIK3R3Q92569 461 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SGCDQ92629 289 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TANKQ92844 425 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PPWD1Q96BP3 646 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 FBXL8Q96CD0 374 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 HDAC11Q96DB2 347 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 OMA1Q96E52 524 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TMEM80Q96HE8 168 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CCDC17Q96LX7 622 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 GLT1D1Q96MS3 346 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 DACH2Q96NX9 599 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TM9SF2Q99805 663 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CLSTN3Q9BQT9 956 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 C6orf62Q9GZU0 229 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TMEM39BQ9GZU3 492 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TRPV6Q9H1D0 765 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SLC6A15Q9H2J7 730 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ATP13A3Q9H7F0 1226 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CCSER2Q9H7U1 834 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 NIPAL2Q9H841 368 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 COQ10BQ9H8M1 238 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF556Q9HAH1 456 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SPC25Q9HBM1 224 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 HPS4Q9NQG7 708 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 DDX4Q9NQI0 724 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ANLNQ9NQW6 1124 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 FARSBQ9NSD9 589 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CCDC59Q9P031 241 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 C11orf21Q9P2W6 132 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 MAPRE3Q9UPY8 281 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 AP3M1Q9Y2T2 418 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 RBMX2Q9Y388 322 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF175Q9Y473 711 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PCDHAC2Q9Y5I4 1007 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 NAV1Q8NEY1 1877 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ADAMTSL1Q8N6G6 1762 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CNTNAP1P78357 1384 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 C7orf72A4D263 438 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TUBAL3A6NHL2 446 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PP2D1A8MPX8 630 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 KPNA7A9QM74 516 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 NPIPB8E9PQR5 432 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 F8W810 466 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 INO80B-WBP1J3KQ70 363 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 NOP56O00567 594 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TBX3O15119 743 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MUSKO15146 869 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 EXTL3O43909 919 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PRDM1O75626 825 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 RNASEH2AO75792 299 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 OR7A10O76100 309 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 DDHD2O94830 711 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CDK14O94921 469 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 GABARAPO95166 117 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TGM6O95932 706 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 APOA4P06727 396 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 GPIP06744 558 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CYP2D6P10635 497 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ITGA2P17301 1181 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CYP3A5P20815 502 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PRKCHP24723 683 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms