RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CNIH3Q8TBE1 160 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 C17orf80Q9BSJ5 609 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 EMILIN2Q9BXX0 1053 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 CARS2Q9HA77 564 aaKnown RBP18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 POLR3BQ9NW08 1133 aaPredicted RBP18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 HOXC10Q9NYD6 342 aa18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 LEF1Q9UJU2 399 aaPredicted RBP18.46■□□□□ 0.55
ECHDC1-214ENST00000474289 A0A1B0GTL3 188 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 TBX1O43435 398 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CNTN5O94779 1100 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CYBBP04839 570 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 EDNRBP24530 442 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CA8P35219 290 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 TGFBR1P36897 503 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CDKN2DP55273 166 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CHRNB3Q05901 458 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 VAC14Q08AM6 782 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 PPP2R2DQ66LE6 453 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 PIM3Q86V86 326 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 HEATR4Q86WZ0 1026 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CRYBG2Q8N1P7 616 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 BEST2Q8NFU1 509 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 OR52K2Q8NGK3 314 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 MCOLN3Q8TDD5 553 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 NTAN1Q96AB6 310 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 ISG20Q96AZ6 181 aaKnown RBP18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CCDC159P0C7I6 412 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CD6P30203 668 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 HCAR3P49019 387 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 SCAPQ12770 1279 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 E2F2Q14209 437 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 ZNF691Q5VV52 312 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 DESI1Q6ICB0 168 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 ARHGAP36Q6ZRI8 547 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 ABI1Q8IZP0 508 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 SVOPQ8N4V2 548 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 CHST13Q8NET6 341 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 SLC2A13Q96QE2 648 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 SLC9A7Q96T83 725 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 RNF38Q9H0F5 515 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 MARCH7Q9H992 704 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 TBC1D14Q9P2M4 693 aa18.45■□□□□ 0.54
ECHDC1-214ENST00000474289 WISP3O95389 354 aaPredicted RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 LAPTM5Q13571 262 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 UBE2UQ5VVX9 321 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 PRSS48Q7RTY5 328 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 DCP2Q8IU60 420 aaKnown RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 RPL3LQ92901 407 aaKnown RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 CLIP3Q96DZ5 547 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 ASB2Q96Q27 587 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 AIG1Q9NVV5 245 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 ERVK-18Q9QC07 812 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 HOXC11O43248 304 aaPredicted RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 BEST1O76090 585 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 FYNP06241 537 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 PPP1R8Q12972 351 aaKnown RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 SELPLGQ14242 412 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 KYAT1Q16773 422 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 TXNDC11Q6PKC3 985 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 PLPPR4Q7Z2D5 763 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 OR7G1Q8NGA0 311 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 COPS5Q92905 334 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 C18orf25Q96B23 403 aaPredicted RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 RBM4BQ9BQ04 359 aaKnown RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 RBM4Q9BWF3 364 aaKnown RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 PLEKHA5Q9HAU0 1116 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 RNF19AQ9NV58 838 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 USE1Q9NZ43 259 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 PNMA8BQ9ULN7 279 aaPredicted RBP18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 LOC285556D6RIA3 1793 aa18.44■□□□□ 0.54
ECHDC1-214ENST00000474289 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 RAD51BO15315 384 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 IDH3BO43837 385 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 PMPCBO75439 489 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 SLC22A3O75751 556 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 ANXA9O76027 345 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 CST1P01037 141 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 ANXA6P08133 673 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 PSMB9P28065 219 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 ADRA1AP35348 466 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 POLR2JP52435 117 aaKnown RBP18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 MTPNP58546 118 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 CCNA1P78396 465 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 CDK5R2Q13319 367 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 NKG7Q16617 165 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 ZNF181Q2M3W8 571 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 VARS2Q5ST30 1063 aaKnown RBP18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 RSBN1Q5VWQ0 802 aaPredicted RBP18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 SPESP1Q6UW49 350 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 LDB1Q86U70 411 aaPredicted RBP18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 SAPCD2Q86UD0 394 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 HID1Q8IV36 788 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 CCDC117Q8IWD4 279 aaPredicted RBP18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 RYBPQ8N488 228 aaPredicted RBP18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 MCFD2Q8NI22 146 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 ZNF566Q969W8 418 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 FCRL5Q96RD9 977 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 FAM49AQ9H0Q0 323 aaPredicted RBP18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 MIR1-1HGQ9H1L0 117 aa18.43■□□□□ 0.54
ECHDC1-214ENST00000474289 DNAJB9Q9UBS3 223 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms