RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LHX9Q9NQ69 397 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 FAM207AQ9NSI2 230 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SAMSN1Q9NSI8 373 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ETNK2Q9NVF9 386 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TAB2Q9NYJ8 693 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 CWC15Q9P013 229 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PCSK1NQ9UHG2 260 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ERRFI1Q9UJM3 462 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PADI1Q9ULC6 663 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SIK3Q9Y2K2 1263 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC30A1Q9Y6M5 507 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 FADS2P1A8MWK0 482 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 KIF1CO43896 1103 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 PRPSAP2O60256 369 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 NUAK1O60285 661 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 LRCH4O75427 683 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 CEACAM4O75871 244 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 RASSF9O75901 435 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 MT-ND3P03897 115 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 DESP17661 470 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 NELFEP18615 380 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 XRCC1P18887 633 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 POU3F2P20265 443 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 CDK11BP21127 795 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 PSMA2P25787 234 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 EEF1GP26641 437 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 PTPN4P29074 926 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 MIPP30301 263 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 MMP13P45452 471 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 HCAR3P49019 387 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 CCL11P51671 97 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 CLCNKAP51800 687 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF135P52742 658 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 MAMLD1Q13495 774 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 IHHQ14623 411 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 CHRNA6Q15825 494 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 DPYSL2Q16555 572 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 C1QL3Q5VWW1 255 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ALG1LQ6GMV1 187 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 JMJD6Q6NYC1 403 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 TMEM26Q6ZUK4 368 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 SYVN1Q86TM6 617 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 BPHLQ86WA6 291 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 PPP1R3BQ86XI6 285 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 PSTKQ8IV42 348 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 RAVER1Q8IY67 606 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 MCOLN2Q8IZK6 566 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ATPAF2Q8N5M1 289 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 AOPEPQ8N6M6 819 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ARMC2Q8NEN0 867 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 KLHL6Q8WZ60 621 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 SEC14L1Q92503 715 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 RSC1A1Q92681 617 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 PLEKHG4BQ96PX9 1271 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 AGPAT1Q99943 283 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 GPR87Q9BY21 358 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC29A3Q9BZD2 475 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 TRIM7Q9C029 511 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ING2Q9H160 280 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 CARD9Q9H257 536 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 NT5MQ9NPB1 228 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 SEPT11Q9NVA2 429 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 TAS2R14Q9NYV8 317 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 SCHIP1Q9P0W5 487 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 LUZP4Q9P127 313 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 MAP10Q9P2G4 905 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF624Q9P2J8 865 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 EPHA6Q9UF33 1036 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF451Q9Y4E5 1061 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 PCDHGB7Q9Y5F8 929 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 VPS13CQ709C8 3753 aa5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 DIDO1Q9BTC0 2240 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF469Q96JG9 3925 aaPredicted RBP5.05□□□□□ -1.6
SNRNP40-204ENST00000474025 IGHV5-51A0A0C4DH38 117 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 C1orf232A0A0U1RR37 186 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ARGFXA6NJG6 315 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 OR52A4PA6NMU1 304 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 H3BRJ5 948 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 GRID2O43424 1007 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 DPM1O60762 260 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 CLDN7O95471 211 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PRLP01236 227 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 VIPP01282 170 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ATP1A3P13637 1013 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 BRAFP15056 766 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 FOLR1P15328 257 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 TCF4P15884 667 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF8P17098 575 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 AMD1P17707 334 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 AMPD1P23109 780 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 IL1R2P27930 398 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PTGIRP43119 386 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SPINT3P49223 89 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 EPHB1P54762 984 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 CDH6P55285 790 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PPP1CAP62136 330 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 TUBB3Q13509 450 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 GPR18Q14330 331 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 KCNAB1Q14722 419 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 KRT31Q15323 416 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms