RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 JMJD6Q6NYC1 403 aaPredicted RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 TMCO3Q6UWJ1 677 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 TMEM26Q6ZUK4 368 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 ZNF571Q7Z3V5 609 aaPredicted RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 SLC9B2Q86UD5 537 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 CPNE8Q86YQ8 564 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 RASGRP3Q8IV61 690 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 CT55Q8WUE5 264 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 HSPH1Q92598 858 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 RSC1A1Q92681 617 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 SH3KBP1Q96B97 665 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 TGM7Q96PF1 710 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 ZWILCHQ9H900 591 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 PCDH18Q9HCL0 1135 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 KLC4Q9NSK0 619 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 LUZP4Q9P127 313 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 CNOT8Q9UFF9 292 aaKnown RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 TMPRSS11EQ9UL52 423 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 PCDHGA9Q9Y5G4 932 aaKnown RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 PCDHGA6Q9Y5G7 932 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 KIR2DS5A0A0G2JLQ3 304 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 A0A0G2JNG1 304 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 KIR2DS3K7RE56 304 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 DDX3XO00571 662 aaKnown RBP eCLIP9.17□□□□□ -0.94
VCL-204ENST00000472585 RNF8O76064 485 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 UBXN7O94888 489 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 NDUFA10O95299 355 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 MT-ND3P03897 115 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 MMP2P08253 660 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 ATP1A3P13637 1013 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 FOLR1P15328 257 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 ZNF30P17039 623 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 CLCNKAP51800 687 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 UBXN1Q04323 297 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 ITKQ08881 620 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 DNASE1L3Q13609 305 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 IL10RAQ13651 578 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 KCNAB1Q14722 419 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 KIR2DS5Q14953 304 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 CHRNA6Q15825 494 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 QPCTQ16769 361 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 ATP13A4Q4VNC1 1196 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 FAM69BQ5VUD6 431 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 LCN10Q6JVE6 187 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 PWWP2BQ6NUJ5 590 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 ADGRG6Q86SQ4 1221 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 PLXDC1Q8IUK5 500 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 ZNF547Q8IVP9 402 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 AOPEPQ8N6M6 819 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 Q8NA96 180 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 GPR26Q8NDV2 337 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 THAP4Q8WY91 577 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 KLHL6Q8WZ60 621 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 MAML1Q92585 1016 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 BTBD6Q96KE9 485 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 PCMTD1Q96MG8 357 aaPredicted RBP9.17□□□□□ -0.94
VCL-204ENST00000472585 LYSMD1Q96S90 227 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 HERPUD2Q9BSE4 406 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 TDRD1Q9BXT4 1180 aaKnown RBP9.17□□□□□ -0.94
VCL-204ENST00000472585 HAUS4Q9H6D7 363 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 UCK1Q9HA47 277 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 LHX9Q9NQ69 397 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.17□□□□□ -0.94
VCL-204ENST00000472585 LNPEPQ9UIQ6 1025 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 PADI1Q9ULC6 663 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 WDR37Q9Y2I8 494 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 PCDHGB7Q9Y5F8 929 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 ZFHX3Q15911 3703 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 CCDC168Q8NDH2 2452 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 SVILO95425 2214 aa9.17□□□□□ -0.94
VCL-204ENST00000472585 MTORP42345 2549 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 NAV3Q8IVL0 2385 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 IGHV5-51A0A0C4DH38 117 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 OR52A4PA6NMU1 304 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 H3BRJ5 948 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 CHUKO15111 745 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 MFSD11O43934 449 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 PRF1P14222 555 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 FERP16591 822 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 CA5AP35218 305 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 PCK1P35558 622 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 GARSP41250 739 aaKnown RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 ARSEP51690 589 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 ZNF135P52742 658 aaPredicted RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 CDH6P55285 790 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 SLC25A11Q02978 314 aaKnown RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 SLC10A2Q12908 348 aaPredicted RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 IL11RAQ14626 422 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 ZXDCQ2QGD7 858 aaPredicted RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 BOLA3Q53S33 107 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 PAPD7Q5XG87 772 aaKnown RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 BLOC1S3Q6QNY0 202 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 FAM92BQ6ZTR7 304 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 C11orf96Q7Z7L8 435 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 HPS6Q86YV9 775 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 RHOT1Q8IXI2 618 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 ATPAF2Q8N5M1 289 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms