RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 SLC16A3O15427 465 aaKnown RBP5.22□□□□□ -1.57
PTPN4-209ENST00000469511 RASA4O43374 803 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 MED7O43513 233 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CEACAM4O75871 244 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 SOD1P00441 154 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 IMPDH2P12268 514 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 TYRP1P17643 537 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 SLC9A1P19634 815 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 LHCGRP22888 699 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CMA1P23946 247 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CASP14P31944 242 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ADRA1BP35368 520 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ETFBP38117 255 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ETV3P41162 512 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 SYKP43405 635 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 FASLGP48023 281 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CDK3Q00526 305 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 FKBP3Q00688 224 aaKnown RBP5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ID3Q02535 119 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 RAD51Q06609 339 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 KCNAB1Q14722 419 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CNGA3Q16281 694 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 MEA1Q16626 185 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CDO1Q16878 200 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 UGT8Q16880 541 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 SLC25A52Q3SY17 297 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 PYCR3Q53H96 274 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ZRANB3Q5FWF4 1079 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 MIIPQ5JXC2 388 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 PRAMEF17Q5VTA0 474 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 PWWP2BQ6NUJ5 590 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 WDR74Q6RFH5 385 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-209ENST00000469511 Q6ZS46 218 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 Q6ZVL8 140 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 TSPAN33Q86UF1 283 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ZNF354CQ86Y25 554 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 RASGRP3Q8IV61 690 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 SLC34A3Q8N130 599 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CBARPQ8N350 705 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-209ENST00000469511 OR10G6Q8NH81 332 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 JOSD2Q8TAC2 188 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ADAMTS17Q8TE56 1095 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 STAMBPL1Q96FJ0 436 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ZPBPQ9BS86 351 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 SLC29A3Q9BZD2 475 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 MAGEH1Q9H213 219 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 GSX1Q9H4S2 264 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-209ENST00000469511 UPF2Q9HAU5 1272 aaKnown RBP5.22□□□□□ -1.57
PTPN4-209ENST00000469511 PDFQ9HBH1 243 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ACSS2Q9NR19 701 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 RAD18Q9NS91 495 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CRIM1Q9NZV1 1036 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 B4GALT6Q9UBX8 382 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 LNPEPQ9UIQ6 1025 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 TMEM59LQ9UK28 342 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 PADI1Q9ULC6 663 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 OSGIN2Q9Y236 505 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 SLC17A4Q9Y2C5 497 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 POLR3KQ9Y2Y1 108 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-209ENST00000469511 PCDHGA6Q9Y5G7 932 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 CSAG2Q9Y5P2 127 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 ABCA2Q9BZC7 2435 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 AKAP6Q13023 2319 aa5.22□□□□□ -1.57
PTPN4-209ENST00000469511 NIPBLQ6KC79 2804 aaeCLIP5.21□□□□□ -1.57
PTPN4-209ENST00000469511 NCOA6Q14686 2063 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 FAM237AA0A1B0GTK4 181 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 GOLGA6CA6NDK9 693 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 GOLGA6BA6NDN3 693 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 GOLGA6L3A6NEY3 463 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 FOXN3O00409 490 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 TRAFD1O14545 582 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 INPP4BO15327 924 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 TMPRSS2O15393 492 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 SNX2O60749 519 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 RAMP2O60895 175 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 F9P00740 461 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 C9P02748 559 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 IVLP07476 585 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 PLEKP08567 350 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 ELFN1P0C7U0 828 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 GOLGA6DP0CG33 693 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 FOLR1P15328 257 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 KELP23276 732 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 PTPN4P29074 926 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 MAPKAPK2P49137 400 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 NDST2P52849 883 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 FOXL2P58012 376 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 NRG1Q02297 640 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 HHEXQ03014 270 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 RAPGEF1Q13905 1077 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 CHRNA6Q15825 494 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 CCDC14Q49A88 953 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 CCDC40Q4G0X9 1142 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 INO80DQ53TQ3 878 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 ZNF648Q5T619 568 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 FAM102AQ5T9C2 384 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-209ENST00000469511 ANKRD34AQ69YU3 496 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 ERAP2Q6P179 960 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 IYDQ6PHW0 289 aa5.21□□□□□ -1.58
PTPN4-209ENST00000469511 SHISA2Q6UWI4 295 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms