RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ANAPC7Q9UJX3 599 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 ADAM28Q9UKQ2 775 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 VAV3Q9UKW4 847 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 PCDHAC2Q9Y5I4 1007 aa4.83□□□□□ -1.64
SF3B1-207ENST00000468925 HEMK1Q9Y5R4 338 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-207ENST00000468925 DNAJC25-GNG10A0A024R161 153 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TMEM265A0A087WTH1 108 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 A0A0B4J203 849 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 A0A1W2PQ67 120 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TCRBV7S2A1N4TA0A589 114 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FAM170AA1A519 330 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 AGAP5A6NIR3 686 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 C9IYK1 514 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SGK1O00141 431 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FOXN3O00409 490 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 STX16O14662 325 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 AIM2O14862 343 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 DCXO43602 365 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TBC1D4O60343 1298 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF780AO75290 641 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MED24O75448 989 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PSIP1O75475 530 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 VAPBO95292 243 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CHRNA1P02708 482 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 C1QBP02746 253 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PGRP06401 933 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CELA3AP09093 270 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 GLULP15104 373 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 KCNA6P17658 529 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 XRCC1P18887 633 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CD247P20963 164 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MATN1P21941 496 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CYP7A1P22680 504 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 NR4A1P22736 598 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PSMA3P25788 255 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 HNF4AP41235 474 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MAGEA6P43360 314 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ABCG1P45844 678 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ARCN1P48444 511 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MARCKSL1P49006 195 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PLA2G16P53816 162 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 RAB14P61106 215 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ACTR2P61160 394 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ADARB1P78563 741 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CHRNDQ07001 517 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CD300CQ08708 224 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 INCA1Q0VD86 236 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TRAF3Q13114 568 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PRKAA1Q13131 559 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 NME3Q13232 169 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CAMK2GQ13555 558 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 DNASE1L3Q13609 305 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 RIN1Q13671 783 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 KCNC3Q14003 757 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 GALEQ14376 348 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 GK3PQ14409 553 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PIGHQ14442 188 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TOMM20Q15388 145 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 NEDD8Q15843 81 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF404Q494X3 552 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MTX3Q5HYI7 312 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FAM76BQ5HYJ3 339 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MDH1BQ5I0G3 518 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PAGE2BQ5JRK9 111 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SPANXN2Q5MJ10 180 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 RNF219Q5W0B1 726 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SEL1L3Q68CR1 1132 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FAM109BQ6ICB4 259 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FIP1L1Q6UN15 594 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 C6orf15Q6UXA7 325 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 LDHAL6AQ6ZMR3 332 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ATG14Q6ZNE5 492 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 BBS12Q6ZW61 710 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PLEKHM3Q6ZWE6 761 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PRSS42Q7Z5A4 293 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CDH24Q86UP0 819 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 LRRTM3Q86VH5 581 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ADGRG3Q86Y34 549 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 LCORLQ8N3X6 602 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TMEM199Q8N511 208 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CCNYL1Q8N7R7 359 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZBTB38Q8NAP3 1195 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 KDM1BQ8NB78 822 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 XXYLT1Q8NBI6 393 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PAPD5Q8NDF8 572 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SETD9Q8NE22 299 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MCUQ8NE86 351 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF555Q8NEP9 628 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 KBTBD8Q8NFY9 601 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SLC35B2Q8TB61 432 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TEX47Q8TBZ9 253 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 DYNC2LI1Q8TCX1 351 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TBCKQ8TEA7 893 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TSPEARQ8WU66 669 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SHC3Q92529 594 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SMG7Q92540 1137 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 RORBQ92753 470 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 UFD1Q92890 307 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ATP6V1E2Q96A05 226 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms