RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PIK3C2AO00443 1686 aa3.46□□□□□ -1.85
XRN1-206ENST00000467077 CRB1P82279 1406 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 PAPPAQ13219 1627 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 PLRG1O43660 514 aaKnown RBP3.46□□□□□ -1.86
XRN1-206ENST00000467077 KLK8O60259 260 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 CAVIN2O95810 425 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 HSD3B1P14060 373 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 EDN2P20800 178 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 CHATP28329 748 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 PSMC2P35998 433 aaKnown RBP3.46□□□□□ -1.86
XRN1-206ENST00000467077 EFNB1P98172 346 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.46□□□□□ -1.86
XRN1-206ENST00000467077 ITGA9Q13797 1035 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 KCNT1Q5JUK3 1230 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 ZNF790Q6PG37 636 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 GFRALQ6UXV0 394 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 ATF7IPQ6VMQ6 1270 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 LRRC8DQ7L1W4 858 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 TADA2BQ86TJ2 420 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 GPAT4Q86UL3 456 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 KIAA2013Q8IYS2 634 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 PLD5Q8N7P1 536 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 STPG4Q8N801 248 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 GCC1Q96CN9 775 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 CABLES2Q9BTV7 478 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 MCRIP2Q9BUT9 160 aaKnown RBP3.46□□□□□ -1.86
XRN1-206ENST00000467077 NUF2Q9BZD4 464 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 INTS2Q9H0H0 1204 aaKnown RBP3.46□□□□□ -1.86
XRN1-206ENST00000467077 SMYD2Q9NRG4 433 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 MAP3K20Q9NYL2 800 aaKnown RBP3.46□□□□□ -1.86
XRN1-206ENST00000467077 KIAA1456Q9P272 454 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 CTNNAL1Q9UBT7 734 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 CNOT7Q9UIV1 285 aaKnown RBP3.46□□□□□ -1.86
XRN1-206ENST00000467077 CARD8Q9Y2G2 431 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 DGKBQ9Y6T7 804 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 COL18A1P39060 1754 aa3.46□□□□□ -1.86
XRN1-206ENST00000467077 SPATA31E1Q6ZUB1 1445 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 WDR90Q96KV7 1748 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 TEX22C9J3V5 150 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 AKR1B15C9JRZ8 316 aaPredicted RBP3.45□□□□□ -1.86
XRN1-206ENST00000467077 TCERG1O14776 1098 aaKnown RBP3.45□□□□□ -1.86
XRN1-206ENST00000467077 GUCY1B2O75343 617 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 ZNF821O75541 412 aaPredicted RBP3.45□□□□□ -1.86
XRN1-206ENST00000467077 MTA2O94776 668 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 EGFP01133 1207 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 URODP06132 367 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 HOXA13P31271 388 aaPredicted RBP3.45□□□□□ -1.86
XRN1-206ENST00000467077 PGM1P36871 562 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 CDH15P55291 814 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 RIGQ13278 110 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 TDGQ13569 410 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 TAF11Q15544 211 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 NFIL3Q16649 462 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 ZNF766Q5HY98 468 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 SIRPB2Q5JXA9 342 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 LRRC8EQ6NSJ5 796 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 SLC22A25Q6T423 547 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 TOM1L2Q6ZVM7 507 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 TMTC1Q8IUR5 882 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 MYRIPQ8NFW9 859 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 STAMBPL1Q96FJ0 436 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 ST6GAL2Q96JF0 529 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 POM121L2Q96KW2 1035 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 KXD1Q9BQD3 176 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 MXRA8Q9BRK3 442 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 TTYH1Q9H313 450 aaPredicted RBP3.45□□□□□ -1.86
XRN1-206ENST00000467077 C17orf75Q9HAS0 396 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 CISD1Q9NZ45 108 aaKnown RBP3.45□□□□□ -1.86
XRN1-206ENST00000467077 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-206ENST00000467077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-206ENST00000467077 NFE2L3Q9Y4A8 694 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 MAP3K5Q99683 1374 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 LTN1O94822 1766 aa3.45□□□□□ -1.86
XRN1-206ENST00000467077 ATP10DQ9P241 1426 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 CPDO75976 1380 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 A0A0G2JLW4 131 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 SH2B2O14492 632 aaPredicted RBP3.44□□□□□ -1.86
XRN1-206ENST00000467077 DCXO43602 365 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 HEXAP06865 529 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 GALTP07902 379 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 PRSS56P0CW18 603 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 GNB3P16520 340 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 ITGA2P17301 1181 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 GPTP24298 496 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 HNRNPH1P31943 449 aaKnown RBP3.44□□□□□ -1.86
XRN1-206ENST00000467077 EFNA5P52803 228 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 ITGADQ13349 1161 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 VEPH1Q14D04 833 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 EFNB3Q15768 340 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 TAF12Q16514 161 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 STXBP5Q5T5C0 1151 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 ZNF774Q6NX45 483 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 TMEM81Q6P7N7 255 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 CYP26C1Q6V0L0 522 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 NOXA1Q86UR1 476 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 C11orf65Q8NCR3 313 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 MAGEC3Q8TD91 643 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 NOC3LQ8WTT2 800 aaKnown RBP3.44□□□□□ -1.86
XRN1-206ENST00000467077 SLC20A1Q8WUM9 679 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms