RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CSH1P0DML2 217 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 CSH2P0DML3 217 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 NR2F1P10589 423 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 STMN1P16949 149 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 ITGA2P17301 1181 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 EDN2P20800 178 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 MAOAP21397 527 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 HOXA1P49639 335 aaPredicted RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 METAP2P50579 478 aaKnown RBP eCLIP4□□□□□ -1.77
ITGB1-208ENST00000464001 HSD17B4P51659 736 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 EEF1A1P68104 462 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 CALD1Q05682 793 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 CHAF1BQ13112 559 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 EIF2S3LQ2VIR3 472 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 KRT71Q3SY84 523 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 TTC31Q49AM3 519 aaPredicted RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 CCNYL2Q5T2Q4 361 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 EEF1A1P5Q5VTE0 462 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 ATG16L1Q676U5 607 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 NAA16Q6N069 864 aaPredicted RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 METTL2BQ6P1Q9 378 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 KCTD8Q6ZWB6 473 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 BTN2A1Q7KYR7 527 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 SZRD1Q7Z422 152 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 CCDC91Q7Z6B0 441 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 PXKQ7Z7A4 578 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 CPLX4Q7Z7G2 160 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 CCDC170Q8IYT3 715 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF34Q8IZ26 560 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF485Q8NCK3 441 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 DUSP19Q8WTR2 217 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 USP6NLQ92738 828 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 JAKMIP2Q96AA8 810 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 ALG14Q96F25 216 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 CALML4Q96GE6 196 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 METTL2AQ96IZ6 378 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 F2RL3Q96RI0 385 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 PHF7Q9BWX1 381 aaPredicted RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 GFRA4Q9GZZ7 299 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 GTF3C4Q9UKN8 822 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 BLOC1S6Q9UL45 172 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 TTC7AQ9ULT0 858 aaPredicted RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 CAMK2AQ9UQM7 478 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 KNSTRNQ9Y448 316 aa4□□□□□ -1.77
ITGB1-208ENST00000464001 LSM4Q9Y4Z0 139 aaKnown RBP4□□□□□ -1.77
ITGB1-208ENST00000464001 CLSPNQ9HAW4 1339 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 PMS2P5A8MQ11 134 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 PTGES3LE9PB15 166 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SCGB1D1O95968 90 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 GALTP07902 379 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 TPM2P07951 284 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 IRF1P10914 325 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SCG2P13521 617 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 BDKRB2P30411 391 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 NNMTP40261 264 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 HNF4AP41235 474 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 NR0B1P51843 470 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 UBASH3AP57075 661 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 STK4Q13043 487 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 PPP2R5BQ15173 497 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 BAK1Q16611 211 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 TMEM266Q2M3C6 531 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 DUSP28Q4G0W2 176 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 ALKBH5Q6P6C2 394 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SHQ1Q6PI26 577 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF852Q6ZMS4 543 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 DENND5BQ6ZUT9 1274 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 DGLUCYQ7Z3D6 616 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 PRPF39Q86UA1 669 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 ARMC8Q8IUR7 673 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 RPAP2Q8IXW5 612 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SLC35F3Q8IY50 421 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 DIS3L2Q8IYB7 885 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SPATA6LQ8N4H0 392 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 TTC39CQ8N584 583 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SRBD1Q8N5C6 995 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 ZBTB2Q8N680 514 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 PLD5Q8N7P1 536 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 TAS1R2Q8TE23 839 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 N4BP2L2Q92802 583 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF622Q969S3 477 aaKnown RBP eCLIP3.99□□□□□ -1.775e-8■□□□□ 8.1
ITGB1-208ENST00000464001 FAM120BQ96EK7 910 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 IWS1Q96ST2 819 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 MTERF1Q99551 399 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SYT17Q9BSW7 474 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 EDEM3Q9BZQ6 932 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 KCNN2Q9H2S1 579 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 NDST4Q9H3R1 872 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SYNCQ9H7C4 482 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 GPR108Q9NPR9 543 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 BEX4Q9NWD9 120 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 TRMT1Q9NXH9 659 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 EPS15L1Q9UBC2 864 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 CNOT7Q9UIV1 285 aaKnown RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 HSF4Q9ULV5 492 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 FAF1Q9UNN5 650 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-208ENST00000464001 TMEM5Q9Y2B1 443 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 LOXL2Q9Y4K0 774 aa3.99□□□□□ -1.77
ITGB1-208ENST00000464001 SH2B2O14492 632 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms