RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CBX8Q9HC52 389 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 OGFRQ9NZT2 677 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 EPHA6Q9UF33 1036 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 KCND3Q9UK17 655 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 SHOC2Q9UQ13 582 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 HEY1Q9Y5J3 304 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 PRR19A6NJB7 356 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 PDZK1P1A8MUH7 402 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 PPP1R12AO14974 1030 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-220ENST00000458038 KCNJ13O60928 360 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 CDK14O94921 469 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 RECKO95980 971 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 GYPCP04921 128 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 IDSP22304 550 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 GFERP55789 205 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 LACTB2Q53H82 288 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-220ENST00000458038 ALS2CLQ60I27 953 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 SLC9A4Q6AI14 798 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 PRSS42Q7Z5A4 293 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 CPNE8Q86YQ8 564 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 TADA1Q96BN2 335 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 ABHD17AQ96GS6 310 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 VPS35Q96QK1 796 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 RAB33BQ9H082 229 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 SLC40A1Q9NP59 571 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 ARFGAP3Q9NP61 516 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 ZNF71Q9NQZ8 489 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-220ENST00000458038 SCHIP1Q9P0W5 487 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-220ENST00000458038 ZNF624Q9P2J8 865 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-220ENST00000458038 SLC23A2Q9UGH3 650 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 ZNF711Q9Y462 761 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.19■□□□□ 0.986e-6■□□□□ 9.8
CPNE1-220ENST00000458038 SLC30A1Q9Y6M5 507 aa21.19■□□□□ 0.98
CPNE1-220ENST00000458038 LRRD1A4D1F6 860 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 CYSRT1A8MQ03 144 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 TYRP1P17643 537 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 ARHGAP25P42331 645 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 SRSF1Q07955 248 aaKnown RBP eCLIP21.18■□□□□ 0.98
CPNE1-220ENST00000458038 C16orf46Q6P387 395 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 CRTC3Q6UUV7 619 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 LUZP1Q86V48 1076 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 BRSK1Q8TDC3 778 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 AGAP3Q96P47 875 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 TGM7Q96PF1 710 aa21.18■□□□□ 0.98
CPNE1-220ENST00000458038 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.18■□□□□ 0.982e-6■■■■□ 24.6
CPNE1-220ENST00000458038 GOLGA6L3A6NEY3 463 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 GOLGA6L19H0YKK7 550 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 APOL1O14791 398 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 RASSF9O75901 435 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 NDST3O95803 873 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 MT-ND3P03897 115 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 TPM3P06753 285 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 TMEM253P0C7T8 217 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 CCNYL3P0C7X3 344 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 FGF5P12034 268 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 CASP14P31944 242 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 DLSTP36957 453 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 CAPZBP47756 277 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 UBAP2LQ14157 1087 aaKnown RBP21.17■□□□□ 0.98
CPNE1-220ENST00000458038 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.17■□□□□ 0.98
CPNE1-220ENST00000458038 ZNF648Q5T619 568 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-220ENST00000458038 ZDHHC20Q5W0Z9 365 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 BZW1Q7L1Q6 419 aaKnown RBP21.17■□□□□ 0.98
CPNE1-220ENST00000458038 RASGRP3Q8IV61 690 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 DTX3LQ8TDB6 740 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 KLHL6Q8WZ60 621 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 CXorf40BQ96DE9 158 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 STAMBPL1Q96FJ0 436 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 FCRL4Q96PJ5 515 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 OR6C1Q96RD1 312 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 TRABDQ9H4I3 376 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 DNAJC16Q9Y2G8 782 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 KCNMB2Q9Y691 235 aa21.17■□□□□ 0.98
CPNE1-220ENST00000458038 USP9YO00507 2555 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-220ENST00000458038 MKRN2OSH3BPM6 223 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 NDUFA10O95299 355 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 PIRTP0C851 137 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 BPIP17213 487 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 SEPHS1P49903 392 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 KLRB1Q12918 225 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 GTF2H3Q13889 308 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 MESDQ14696 234 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 TEX44Q53QW1 395 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 ODF2Q5BJF6 829 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 LRRC38Q5VT99 294 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 BPHLQ86WA6 291 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-220ENST00000458038 ZNF547Q8IVP9 402 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 TTC25Q96NG3 672 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 OLFM3Q96PB7 478 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 ANP32EQ9BTT0 268 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 CROTQ9UKG9 612 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 PADI1Q9ULC6 663 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 POLHQ9Y253 713 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 PCDHGA6Q9Y5G7 932 aa21.16■□□□□ 0.98
CPNE1-220ENST00000458038 RELNP78509 3460 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 C3orf70A6NLC5 250 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-220ENST00000458038 BRAFP15056 766 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 HMGCLP35914 325 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 HALP42357 657 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 TMEM115Q12893 351 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms