RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CATSPERZQ9NTU4 200 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 VPS18Q9P253 973 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 MOSPD1Q9UJG1 213 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 PCYT1BQ9Y5K3 369 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-202ENST00000451053 FAM169AQ9Y6X4 670 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 OTOGLQ3ZCN5 2332 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 A0A1B0GTQ1 180 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 CD3EAPO15446 510 aaKnown RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 GDF9O60383 454 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 SDC3O75056 442 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 DNAJC6O75061 913 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 RASGRP1O95267 797 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF8P17098 575 aaPredicted RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 JUNDP17535 347 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 AKT1P31749 480 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 HK3P52790 923 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 B4GALNT1Q00973 533 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 IFFO1Q0D2I5 559 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 TCEA2Q15560 299 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 UAP1Q16222 522 aaPredicted RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 AASDHQ4L235 1098 aaPredicted RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 FASTKD1Q53R41 847 aaKnown RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 LDB1Q86U70 411 aaPredicted RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 CNPY4Q8N129 248 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 OTUD6BQ8N6M0 293 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 GABPB2Q8TAK5 448 aaPredicted RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 SCARF2Q96GP6 870 aaPredicted RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 BOCQ9BWV1 1114 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 CARS2Q9HA77 564 aaKnown RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 PPCSQ9HAB8 311 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 C20orf96Q9NUD7 363 aaPredicted RBP12.88□□□□□ -0.35
VPS33A-202ENST00000451053 ZDHHC3Q9NYG2 299 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 SUFUQ9UMX1 484 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
VPS33A-202ENST00000451053 CACNA1EQ15878 2313 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 IGLV3-16A0A075B6K0 115 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 NUAK1O60285 661 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 CDK14O94921 469 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 F7P08709 466 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 MSH3P20585 1137 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 EPHA8P29322 1005 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 SSTR1P30872 391 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 GNPDA1P46926 289 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 RXRGP48443 463 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 CTSCP53634 463 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 ATXN3P54252 364 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 TMEM115Q12893 351 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 BNIP3Q12983 259 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 TRMT10BQ6PF06 316 aaKnown RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 CAPN12Q6ZSI9 719 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 CYS1Q717R9 158 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 DET1Q7L5Y6 550 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 IQCKQ8N0W5 287 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 OXR1Q8N573 874 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 RASGEF1AQ8N9B8 481 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 CDKL2Q92772 493 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 CYTH2Q99418 400 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 COPS8Q99627 209 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 LRRC61Q9BV99 259 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 SLC13A1Q9BZW2 595 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 EPB41L4BQ9H329 900 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 APOBEC3BQ9UH17 382 aaKnown RBP12.87□□□□□ -0.35
VPS33A-202ENST00000451053 PLAAQ9Y263 795 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 DGKBQ9Y6T7 804 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 USP34Q70CQ2 3546 aa12.87□□□□□ -0.35
VPS33A-202ENST00000451053 TCRBV9S1A1TA0A576 114 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 H3BM21 787 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 MAP2K7O14733 419 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 CHUKO15111 745 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 VEGFDO43915 354 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 OR1I1O60431 355 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 DFNA5O60443 496 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 PIAS2O75928 621 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 TNFP01375 233 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 CELA2BP08218 269 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 CCT8P50990 548 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 GPX6P59796 221 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 GPS2Q13227 327 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 NAB1Q13506 487 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 C1orf61Q13536 156 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 GTF2H3Q13889 308 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 PYCR3Q53H96 274 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 HSP90AA5PQ58FG0 334 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 AARS2Q5JTZ9 985 aaKnown RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 UBAP2Q5T6F2 1119 aaKnown RBP12.86□□□□□ -0.35
VPS33A-202ENST00000451053 ZNF470Q6ECI4 717 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 NEPROQ6NW34 567 aa12.86□□□□□ -0.35
VPS33A-202ENST00000451053 CRTC3Q6UUV7 619 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms