RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 CYP4F8P98187 520 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 RBBP7Q16576 425 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 SCIMPQ6UWF3 145 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 SBSNQ6UWP8 590 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 FAM151BQ6UXP7 276 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 CYP2R1Q6VVX0 501 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 SPATA31D4Q6ZUB0 917 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 DDX53Q86TM3 631 aaKnown RBP16.81■□□□□ 0.28
CTSD-204ENST00000433655 STK40Q8N2I9 435 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 CATSPER1Q8NEC5 780 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 PDLIM5Q96HC4 596 aaKnown RBP16.81■□□□□ 0.28
CTSD-204ENST00000433655 ACOX2Q99424 681 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 BOCQ9BWV1 1114 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 UBAP1Q9NZ09 502 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 CD274Q9NZQ7 290 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 TMCO1Q9UM00 188 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 PCDHGB4Q9UN71 923 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 AP4S1Q9Y587 144 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 PCDHGB5Q9Y5G0 923 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 SLC30A1Q9Y6M5 507 aa16.81■□□□□ 0.28
CTSD-204ENST00000433655 PRMT5O14744 637 aaPredicted RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 TEX28O15482 410 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 HTRA2O43464 458 aaPredicted RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 AP1G1O43747 822 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 SNX2O60749 519 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 ZNF821O75541 412 aaPredicted RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 CRCPO75575 148 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 OR4F21O95013 312 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 VEGFBP49765 207 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 CDKL1Q00532 357 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 C18orf21Q32NC0 220 aaPredicted RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 GAREM2Q75VX8 874 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 SPATA19Q7Z5L4 167 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 SERPINA9Q86WD7 417 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 SLC15A3Q8IY34 581 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 MINDY1Q8N5J2 469 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 OR52B6Q8NGF0 335 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 OR56A4Q8NGH8 313 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 ZNF382Q96SR6 550 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 UHRF1Q96T88 793 aaPredicted RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 IL1RL2Q9HB29 575 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 NUDT4Q9NZJ9 180 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 RAB26Q9ULW5 256 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 PRSS21Q9Y6M0 314 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 PTPRSQ13332 1948 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 C15orf38-AP3S2A0A0A6YYH1 394 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 TYW5A2RUC4 315 aaKnown RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 PRAMEF1O95521 474 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 TRBC1P01850 177 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 CYBBP04839 570 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 APLP1P51693 650 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 ERVPABLB-1P60509 514 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 LETMD1Q6P1Q0 360 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 GPRIN3Q6ZVF9 776 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 ARPINQ7Z6K5 226 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 ZSWIM9Q86XI8 627 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 BBS7Q8IWZ6 715 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 DCBLD1Q8N8Z6 715 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 FAM110BQ8TC76 370 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 LRTOMTQ8WZ04 291 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 TOX2Q96NM4 488 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 CDK15Q96Q40 435 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 PIDD1Q9HB75 910 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 CMTM6Q9NX76 183 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 TSR3Q9UJK0 312 aaKnown RBP16.8■□□□□ 0.28
CTSD-204ENST00000433655 PCDHB1Q9Y5F3 818 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 AP4B1Q9Y6B7 739 aa16.8■□□□□ 0.28
CTSD-204ENST00000433655 PLXNB3Q9ULL4 1909 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 ANGPT2O15123 496 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 LILRB3O75022 631 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 ZNF26P17031 533 aaPredicted RBP16.79■□□□□ 0.28
CTSD-204ENST00000433655 RPS3P23396 243 aaKnown RBP eCLIP16.79■□□□□ 0.282e-22■■■■■ 30.1
CTSD-204ENST00000433655 SLC7A1P30825 629 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 CHN2P52757 468 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 LMAN2Q12907 356 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 CAPRIN1Q14444 709 aaKnown RBP16.79■□□□□ 0.28
CTSD-204ENST00000433655 COQ5Q5HYK3 327 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 HMBOX1Q6NT76 420 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 CERS6Q6ZMG9 384 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 TTC16Q8NEE8 873 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 RIN3Q8TB24 985 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 TRAPPC9Q96Q05 1148 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 HOPXQ9BPY8 73 aaPredicted RBP16.79■□□□□ 0.28
CTSD-204ENST00000433655 C2orf49Q9BVC5 232 aaPredicted RBP16.79■□□□□ 0.28
CTSD-204ENST00000433655 LRRC3Q9BY71 257 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 BRINP2Q9C0B6 783 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 PLK2Q9NYY3 685 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 SPG21Q9NZD8 308 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 CNOT6Q9ULM6 557 aaKnown RBP16.79■□□□□ 0.28
CTSD-204ENST00000433655 AK5Q9Y6K8 562 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 TRBV5-4A0A0C4DH59 114 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 CCL5P13501 91 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 SLC6A2P23975 617 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 GABRR2P28476 465 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 IRX1P78414 480 aaPredicted RBP16.79■□□□□ 0.28
CTSD-204ENST00000433655 RCAN2Q14206 197 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 RETSATQ6NUM9 610 aa16.79■□□□□ 0.28
CTSD-204ENST00000433655 EFL1Q7Z2Z2 1120 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms